CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm015540
(
Prunus mume
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
Pm015540
T246375_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm015540
LOB
4
72
SCNGCRILRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPGQYLSFVHF
Links
Other
LOB
family TFs
Other
Prunus mume
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK03169.1
Cannabis sativa
PK03169.1
N
0.859
MTR_7g007010
Medicago truncatula
MTR_7g007010
N
0.844
Traes_4BL_D44ACD58E
Triticum aestivum
Traes_4BL_D44ACD58E
N
0.825
Carubv10000015m.g
Capsella rubella
Carubv10000015m.g
N
0.797
PK04625.1
Cannabis sativa
PK04625.1
N
0.791
OLONG_008015
Oryza longistaminata
OLONG_008015
N
0.778
OB01G27020
Oryza brachyantha
OB01G27020
N
0.750
PK25954.1
Cannabis sativa
PK25954.1
N
0.739
Pm029059
Prunus mume
Pm029059
N
0.734
Eucgr.G02321
Eucalyptus grandis
Eucgr.G02321
N
0.734
Gorai.006G061200
Gossypium raimondii
Gorai.006G061200
N
0.719
MDP0000233303
Malus domestica
MDP0000233303
N
0.703