SELMODRAFT_68039 (Selaginella moellendorffii)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 SELMODRAFT_68039 T249807_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASIL2
M06973_2.00 		Arabidopsis thaliana
TCRCCGGARAH
DTYTCCGGYGA		 Dap-seq
OMalley et al.(2016)
At3g14180_col 		0.857 0.643
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ27884 MADF 20 101

Links

Other MADF family TFs
Other Selaginella moellendorffii TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SELMODRAFT_68041 Selaginella moellendorffii SELMODRAFT_68041 I 0.971
AMTR_s00021p00065350 Amborella trichopoda AMTR_s00021p00065350 I 0.858
ASIL2 Arabidopsis thaliana AT3G14180 D 0.857
fgenesh2_kg.3__1533__AT3G14180.1 Arabidopsis lyrata fgenesh2_kg.3__1533__AT3G14180.1 I 0.857
Bostr.28625s0287 Boechera stricta Bostr.28625s0287 I 0.857
Cagra.3631s0005 Capsella grandiflora Cagra.3631s0005 I 0.857
Carubv10015321m.g Capsella rubella Carubv10015321m.g I 0.857
Thhalv10020691m.g Eutrema salsugineum Thhalv10020691m.g I 0.857
GSMUA_Achr9G06410_001 Musa acuminata GSMUA_Achr9G06410_001 I 0.851
LjSGA_058481.1 Lotus japonicus LjSGA_058481.1 I 0.851
Bo3g065930 Brassica oleracea Bo3g065930 I 0.845
Aquca_020_00550 Aquilegia coerulea Aquca_020_00550 I 0.832
GSMUA_Achr6G26840_001 Musa acuminata GSMUA_Achr6G26840_001 I 0.824
PRUPE_ppa009171mg Prunus persica PRUPE_ppa009171mg I 0.821
Ca_19877 Cicer arietinum Ca_19877 I 0.821
VIT_12s0028g02150 Vitis vinifera VIT_12s0028g02150 I 0.820
GSMUA_Achr1G27460_001 Musa acuminata GSMUA_Achr1G27460_001 I 0.818
GSMUA_Achr5G09160_001 Musa acuminata GSMUA_Achr5G09160_001 I 0.815
GSMUA_Achr9G14340_001 Musa acuminata GSMUA_Achr9G14340_001 N 0.812