AT5G27944 (Arabidopsis thaliana)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 AT5G27944 T252917_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G27944.1 MADS box 27 75

Links

Other MADS box family TFs
Other Arabidopsis thaliana TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGL89 Arabidopsis thaliana AT5G27580 N 0.958
AGL93 Arabidopsis thaliana AT5G26950 N 0.917
AGL53 Arabidopsis thaliana AT5G27070 N 0.917
AGL54 Arabidopsis thaliana AT5G27090 N 0.917
fgenesh2_kg.6__2748__AT5G27944.1 Arabidopsis lyrata fgenesh2_kg.6__2748__AT5G27944.1 N 0.917
fgenesh2_kg.6__2751__AT5G27070.1 Arabidopsis lyrata fgenesh2_kg.6__2751__AT5G27070.1 N 0.917
scaffold_602835.1 Arabidopsis lyrata scaffold_602835.1 N 0.917
Carubv10003642m.g Capsella rubella Carubv10003642m.g N 0.830
Carubv10003716m.g Capsella rubella Carubv10003716m.g N 0.812
Cagra.29077s0001 Capsella grandiflora Cagra.29077s0001 N 0.792
Bostr.29827s0112 Boechera stricta Bostr.29827s0112 N 0.771
AGL105 Arabidopsis thaliana AT5G37415 I 0.731