Cagra.29077s0001 (Capsella grandiflora)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Cagra.29077s0001 T257698_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.29077s0001.1.p MADS box 24 71

Links

Other MADS box family TFs
Other Capsella grandiflora TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10003642m.g Capsella rubella Carubv10003642m.g N 0.979
Carubv10003716m.g Capsella rubella Carubv10003716m.g N 0.875
AGL54 Arabidopsis thaliana AT5G27090 N 0.809
AGL89 Arabidopsis thaliana AT5G27580 N 0.809
fgenesh2_kg.6__2748__AT5G27944.1 Arabidopsis lyrata fgenesh2_kg.6__2748__AT5G27944.1 N 0.809
fgenesh2_kg.6__2751__AT5G27070.1 Arabidopsis lyrata fgenesh2_kg.6__2751__AT5G27070.1 N 0.809
scaffold_602835.1 Arabidopsis lyrata scaffold_602835.1 N 0.809
AGL105 Arabidopsis thaliana AT5G37415 I 0.808
AT5G27944 Arabidopsis thaliana AT5G27944 N 0.792
AGL93 Arabidopsis thaliana AT5G26950 N 0.750
AGL53 Arabidopsis thaliana AT5G27070 N 0.750
Bostr.29827s0112 Boechera stricta Bostr.29827s0112 N 0.745
Bostr.3751s0031 Boechera stricta Bostr.3751s0031 I 0.702