CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo5g061120
(
Brassica oleracea
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Bo5g061120
T253124_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo5g061120.1
MADS box
16
63
KVTKNEDRMVTFSKRKNGIYTKLSELSILCGADVGFLIYSGSGKPFTF
Links
Other
MADS box
family TFs
Other
Brassica oleracea
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra032347
Brassica rapa
Bra032347
N
0.958
Bostr.15697s0292
Boechera stricta
Bostr.15697s0292
N
0.792
AGL64
Arabidopsis thaliana
AT1G29962
N
0.771
AGL85
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1002660
N
0.771
Thhalv10009431m.g
Eutrema salsugineum
Thhalv10009431m.g
N
0.771
Cagra.5647s0017
Capsella grandiflora
Cagra.5647s0017
N
0.729
AGL59
Arabidopsis thaliana
AT1G28460
N
0.708
Carubv10011216m.g
Capsella rubella
Carubv10011216m.g
N
0.708