AGL85 (Arabidopsis lyrata)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 fgenesh1_pg.C_scaffold_1002660 T254002_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_1002660 MADS box 16 63

Links

Other MADS box family TFs
Other Arabidopsis lyrata TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGL64 Arabidopsis thaliana AT1G29962 N 1.000
Bostr.15697s0292 Boechera stricta Bostr.15697s0292 N 0.938
AGL85 Arabidopsis thaliana AT1G54760 N 0.923
Cagra.5647s0017 Capsella grandiflora Cagra.5647s0017 N 0.875
Carubv10011216m.g Capsella rubella Carubv10011216m.g N 0.875
AGL59 Arabidopsis thaliana AT1G28460 N 0.854
AGL58 Arabidopsis thaliana AT1G28450 N 0.833
Cagra.18025s0001 Capsella grandiflora Cagra.18025s0001 N 0.792
Carubv10012479m.g Capsella rubella Carubv10012479m.g N 0.792
Bo5g061120 Brassica oleracea Bo5g061120 N 0.771
Carubv10002683m.g Capsella rubella Carubv10002683m.g N 0.771
Carubv10012214m.g Capsella rubella Carubv10012214m.g N 0.771
Carubv10021725m.g Capsella rubella Carubv10021725m.g N 0.771
Carubv10022123m.g Capsella rubella Carubv10022123m.g N 0.771
Bra032347 Brassica rapa Bra032347 N 0.750
Carubv10010430m.g Capsella rubella Carubv10010430m.g N 0.750
Carubv10010438m.g Capsella rubella Carubv10010438m.g N 0.750
Carubv10010833m.g Capsella rubella Carubv10010833m.g N 0.750
Carubv10021425m.g Capsella rubella Carubv10021425m.g N 0.750
Carubv10021446m.g Capsella rubella Carubv10021446m.g N 0.750
Carubv10022052m.g Capsella rubella Carubv10022052m.g N 0.750
Carubv10022431m.g Capsella rubella Carubv10022431m.g N 0.750
Cagra.12398s0004 Capsella grandiflora Cagra.12398s0004 N 0.729
Thhalv10009431m.g Eutrema salsugineum Thhalv10009431m.g N 0.729
Carubv10002712m.g Capsella rubella Carubv10002712m.g N 0.708
Carubv10021838m.g Capsella rubella Carubv10021838m.g N 0.708