Carubv10021838m.g (Capsella rubella)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Carubv10021838m.g T257807_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10021838m MADS box 16 63

Links

Other MADS box family TFs
Other Capsella rubella TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10021362m.g Capsella rubella Carubv10021362m.g N 0.941
Carubv10021725m.g Capsella rubella Carubv10021725m.g N 0.896
Carubv10022123m.g Capsella rubella Carubv10022123m.g N 0.896
Carubv10021267m.g Capsella rubella Carubv10021267m.g N 0.889
Carubv10021446m.g Capsella rubella Carubv10021446m.g N 0.875
Carubv10021425m.g Capsella rubella Carubv10021425m.g N 0.854
Carubv10022052m.g Capsella rubella Carubv10022052m.g N 0.854
Carubv10022431m.g Capsella rubella Carubv10022431m.g N 0.854
Carubv10011216m.g Capsella rubella Carubv10011216m.g N 0.750
Cagra.18025s0001 Capsella grandiflora Cagra.18025s0001 N 0.729
Cagra.5647s0017 Capsella grandiflora Cagra.5647s0017 N 0.729
Carubv10002683m.g Capsella rubella Carubv10002683m.g N 0.729
Carubv10002787m.g Capsella rubella Carubv10002787m.g N 0.727
AGL64 Arabidopsis thaliana AT1G29962 N 0.708
AGL85 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1002660 N 0.708
Bostr.15697s0292 Boechera stricta Bostr.15697s0292 N 0.708
Carubv10002712m.g Capsella rubella Carubv10002712m.g N 0.708
Carubv10010833m.g Capsella rubella Carubv10010833m.g N 0.708
Carubv10012214m.g Capsella rubella Carubv10012214m.g N 0.708