Carubv10021425m.g (Capsella rubella)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Carubv10021425m.g T257797_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10021425m MADS box 7 54

Links

Other MADS box family TFs
Other Capsella rubella TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10021362m.g Capsella rubella Carubv10021362m.g N 0.971
Carubv10021725m.g Capsella rubella Carubv10021725m.g N 0.938
Carubv10022123m.g Capsella rubella Carubv10022123m.g N 0.938
Carubv10021267m.g Capsella rubella Carubv10021267m.g N 0.926
Carubv10021446m.g Capsella rubella Carubv10021446m.g N 0.917
Carubv10022052m.g Capsella rubella Carubv10022052m.g N 0.896
Carubv10022431m.g Capsella rubella Carubv10022431m.g N 0.896
Carubv10021838m.g Capsella rubella Carubv10021838m.g N 0.854
Carubv10011216m.g Capsella rubella Carubv10011216m.g N 0.792
Cagra.18025s0001 Capsella grandiflora Cagra.18025s0001 N 0.771
Cagra.5647s0017 Capsella grandiflora Cagra.5647s0017 N 0.771
Carubv10002683m.g Capsella rubella Carubv10002683m.g N 0.771
Carubv10002712m.g Capsella rubella Carubv10002712m.g N 0.771
AGL64 Arabidopsis thaliana AT1G29962 N 0.750
AGL85 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1002660 N 0.750
Bostr.15697s0292 Boechera stricta Bostr.15697s0292 N 0.750
Carubv10010438m.g Capsella rubella Carubv10010438m.g N 0.750
Carubv10012214m.g Capsella rubella Carubv10012214m.g N 0.750
Cagra.12398s0004 Capsella grandiflora Cagra.12398s0004 N 0.729
Carubv10010430m.g Capsella rubella Carubv10010430m.g N 0.729
Carubv10010833m.g Capsella rubella Carubv10010833m.g N 0.729
Carubv10012479m.g Capsella rubella Carubv10012479m.g N 0.729
Carubv10002787m.g Capsella rubella Carubv10002787m.g N 0.727