cassava44772.m1 (Manihot esculenta)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 cassava44772.m1 T257236_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava44772.m1 MADS box 23 70

Links

Other MADS box family TFs
Other Manihot esculenta TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava27922.m1 Manihot esculenta cassava27922.m1 N 0.854
POPTR_0016s12650 Populus trichocarpa POPTR_0016s12650 N 0.830
POPTR_0016s12640 Populus trichocarpa POPTR_0016s12640 N 0.809
28348.m000077 Ricinus communis 28348.m000077 N 0.809
Lus10003940.g Linum usitatissimum Lus10003940.g N 0.809
Lus10037450.g Linum usitatissimum Lus10037450.g N 0.809
SapurV1A.0175s0180 Salix purpurea SapurV1A.0175s0180 N 0.792
SapurV1A.0175s0160 Salix purpurea SapurV1A.0175s0160 N 0.771
SapurV1A.0175s0190 Salix purpurea SapurV1A.0175s0190 N 0.771
Lus10015726.g Linum usitatissimum Lus10015726.g N 0.750
Lus10003481.g Linum usitatissimum Lus10003481.g N 0.745
MDP0000237091 Malus domestica MDP0000237091 I 0.729