CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0175s0190
(
Salix purpurea
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
SapurV1A.0175s0190
T259011_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0175s0190.1.p
MADS box
26
72
RVEKESNRYVTFSKRKNGLFKKATELSTLCGAETAVIIFSEQRKLFS
Links
Other
MADS box
family TFs
Other
Salix purpurea
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.0175s0180
Salix purpurea
SapurV1A.0175s0180
N
0.979
SapurV1A.0175s0160
Salix purpurea
SapurV1A.0175s0160
N
0.957
POPTR_0016s12640
Populus trichocarpa
POPTR_0016s12640
N
0.915
POPTR_0016s12650
Populus trichocarpa
POPTR_0016s12650
N
0.915
cassava44772.m1
Manihot esculenta
cassava44772.m1
N
0.771
cassava27922.m1
Manihot esculenta
cassava27922.m1
N
0.766
Lus10015726.g
Linum usitatissimum
Lus10015726.g
N
0.745
Lus10003481.g
Linum usitatissimum
Lus10003481.g
N
0.723
Lus10003940.g
Linum usitatissimum
Lus10003940.g
N
0.723
Lus10037450.g
Linum usitatissimum
Lus10037450.g
N
0.723