CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA05G16560
(
Oryza nivara
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
ONIVA05G16560
T260794_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA05G16560.1
MBD
16
159
TQRKRGSSTDSIGMYAVQCCECHKWRKVPTKDEFETIRENFTEEPWHCSRRPDCSCEDPADIEYDSSRIWVLDKPNIPKPPAGTERLVIMRGDLSKMDTYYVMPNGKRVRCTAEVDKFLEANPQYKDRFSVESFSFTTPKIVEE
Links
Other
MBD
family TFs
Other
Oryza nivara
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART05G15970
Oryza barthii
OBART05G15970
N
1.000
OGLUM05G16860
Oryza glumaepatula
OGLUM05G16860
N
1.000
ORGLA05G0138800
Oryza glaberrima
ORGLA05G0138800
N
1.000
ORUFI05G17110
Oryza rufipogon
ORUFI05G17110
N
1.000
OB05G23880
Oryza brachyantha
OB05G23880
N
0.898
BRADI2G25777
Brachypodium distachyon
BRADI2G25777
N
0.776
GRMZM2G040131
Zea mays
GRMZM2G040131
N
0.712
GRMZM5G847045
Zea mays
GRMZM5G847045
N
0.712
Pavir.J02208
Panicum virgatum
Pavir.J02208
N
0.700