CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ORUFI05G17110
(
Oryza rufipogon
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
ORUFI05G17110
T260829_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORUFI05G17110.1
MBD
100
174
WVLDKPNIPKPPAGTERLVIMRGDLSKMDTYYVMPNGKRVRCTAEVDKFLEANPQYKDRFSVESFSFTTPKIVEE
ORUFI05G17110.2
MBD
16
159
TQRKRGSSTDSIGMYAVQCCECHKWRKVPTKDEFETIRENFTEEPWHCSRRPDCSCEDPADIEYDSSRIWVLDKPNIPKPPAGTERLVIMRGDLSKMDTYYVMPNGKRVRCTAEVDKFLEANPQYKDRFSVESFSFTTPKIVEE
ORUFI05G17110.3
MBD
92
162
KPNIPKPPAGTERLVIMRGDLSKMDTYYVMPNGKRVRCTAEVDKFLEANPQYKDRFSVESFSFTTPKIVEE
Links
Other
MBD
family TFs
Other
Oryza rufipogon
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA018080
Oryza indica
BGIOSGA018080
N
1.000
OBART05G15970
Oryza barthii
OBART05G15970
N
1.000
OGLUM05G16860
Oryza glumaepatula
OGLUM05G16860
N
1.000
ONIVA05G16560
Oryza nivara
ONIVA05G16560
N
1.000
ORGLA05G0138800
Oryza glaberrima
ORGLA05G0138800
N
1.000
OS05G0404600
Oryza sativa
OS05G0404600
N
1.000
OB05G23880
Oryza brachyantha
OB05G23880
N
0.898
LPERR05G12640
Leersia perrieri
LPERR05G12640
N
0.892
BRADI2G25777
Brachypodium distachyon
BRADI2G25777
N
0.776
Sb09g019910
Sorghum bicolor
Sb09g019910
N
0.730
GRMZM2G040131
Zea mays
GRMZM2G040131
N
0.712
GRMZM5G847045
Zea mays
GRMZM5G847045
N
0.712
Pavir.J12441
Panicum virgatum
Pavir.J12441
N
0.703
Pavir.J02208
Panicum virgatum
Pavir.J02208
N
0.700