Pavir.J02208 (Panicum virgatum)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Pavir.J02208 T261606_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J02208.1.p MBD 90 158

Links

Other MBD family TFs
Other Panicum virgatum TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J12441 Panicum virgatum Pavir.J12441 N 0.960
Sb09g019910 Sorghum bicolor Sb09g019910 N 0.920
GRMZM5G847045 Zea mays GRMZM5G847045 N 0.885
GRMZM2G040131 Zea mays GRMZM2G040131 N 0.885
Sb09g019900 Sorghum bicolor Sb09g019900 N 0.800
Si023375m.g Setaria italica Si023375m.g N 0.723
LPERR05G12640 Leersia perrieri LPERR05G12640 N 0.720
ONIVA05G16560 Oryza nivara ONIVA05G16560 N 0.700
OBART05G15970 Oryza barthii OBART05G15970 N 0.700
OGLUM05G16860 Oryza glumaepatula OGLUM05G16860 N 0.700
ORGLA05G0138800 Oryza glaberrima ORGLA05G0138800 N 0.700
ORUFI05G17110 Oryza rufipogon ORUFI05G17110 N 0.700