Pavir.J12441 (Panicum virgatum)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Pavir.J12441 T261609_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J12441.1.p MBD 88 160
Pavir.J12441.2.p MBD 88 160

Links

Other MBD family TFs
Other Panicum virgatum TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J02208 Panicum virgatum Pavir.J02208 N 0.960
Si023375m.g Setaria italica Si023375m.g N 0.954
Sb09g019910 Sorghum bicolor Sb09g019910 N 0.861
GRMZM2G040131 Zea mays GRMZM2G040131 N 0.846
GRMZM5G847045 Zea mays GRMZM5G847045 N 0.846
Sb09g019900 Sorghum bicolor Sb09g019900 N 0.792
LPERR05G12640 Leersia perrieri LPERR05G12640 N 0.764
OS05G0404600 Oryza sativa OS05G0404600 N 0.703
ORUFI05G17110 Oryza rufipogon ORUFI05G17110 N 0.703
BGIOSGA018080 Oryza indica BGIOSGA018080 N 0.703