AMTR_s00087p00039380 (Amborella trichopoda)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 AMTR_s00087p00039380 T266238_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ERN02558 Myb 5 34

Links

Other Myb/SANT family TFs
Other Amborella trichopoda TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava45648.m1 Manihot esculenta cassava45648.m1 N 0.762
Pavir.Eb02286 Panicum virgatum Pavir.Eb02286 N 0.762
Pavir.J14839 Panicum virgatum Pavir.J14839 N 0.762
CM0385.220.nd Lotus japonicus CM0385.220.nd N 0.762
MTR_1g087540 Medicago truncatula MTR_1g087540 N 0.758
LjSGA_057038.1 Lotus japonicus LjSGA_057038.1 N 0.746
LjSGA_057664.1 Lotus japonicus LjSGA_057664.1 N 0.744
LjSGA_034303.1 Lotus japonicus LjSGA_034303.1 N 0.743
MLOC_39554 Hordeum vulgare MLOC_39554 I 0.736
Traes_7DS_76515C538 Triticum aestivum Traes_7DS_76515C538 N 0.736
Pm000007 Prunus mume Pm000007 N 0.736
ORGLA02G0219000 Oryza glaberrima ORGLA02G0219000 N 0.735
cassava15703.m1 Manihot esculenta cassava15703.m1 N 0.733
Pavir.Db00878 Panicum virgatum Pavir.Db00878 N 0.729
POPTR_0013s05310 Populus trichocarpa POPTR_0013s05310 I 0.726
Traes_7AS_ADDEF000C Triticum aestivum Traes_7AS_ADDEF000C N 0.726
Cagra.5789s0001 Capsella grandiflora Cagra.5789s0001 N 0.716
PDK_20s1922781g001 Phoenix dactylifera PDK_20s1922781g001 N 0.716
Cagra.0876s0043 Capsella grandiflora Cagra.0876s0043 N 0.713
LjSGA_014958.1 Lotus japonicus LjSGA_014958.1 N 0.713
MLOC_18177 Hordeum vulgare MLOC_18177 I 0.710
mgf023771m Mimulus guttatus mgf023771m N 0.710
chr1.CM0600.120.nd Lotus japonicus chr1.CM0600.120.nd N 0.709
OB06G28240 Oryza brachyantha OB06G28240 N 0.708
TCM_041010 Theobroma cacao TCM_041010 I 0.708
Traes_7AS_FD974A17F Triticum aestivum Traes_7AS_FD974A17F N 0.708
Eucgr.B03766 Eucalyptus grandis Eucgr.B03766 N 0.708
PK18646.1 Cannabis sativa PK18646.1 N 0.706
Ca_10215 Cicer arietinum Ca_10215 N 0.705
Bostr.13129s0196 Boechera stricta Bostr.13129s0196 I 0.704
OGLUM11G01380 Oryza glumaepatula OGLUM11G01380 N 0.703
Bo8g104180 Brassica oleracea Bo8g104180 N 0.699
PGSC0003DMG401010883 Solanum tuberosum PGSC0003DMG401010883 N 0.693
AMTR_s00057p00069720 Amborella trichopoda AMTR_s00057p00069720 N 0.691
F775_42755 Aegilops tauschii F775_42755 N 0.691
OS05G0132700 Oryza sativa OS05G0132700 N 0.691
Cucsa.051050 Cucumis sativus Cucsa.051050 I 0.690
Bo4g198650 Brassica oleracea Bo4g198650 N 0.689
Gorai.008G086400 Gossypium raimondii Gorai.008G086400 I 0.689
PK00358.1 Cannabis sativa PK00358.1 N 0.689
PK21717.1 Cannabis sativa PK21717.1 N 0.689
POPTR_0017s10780 Populus trichocarpa POPTR_0017s10780 N 0.687
Pavir.J25377 Panicum virgatum Pavir.J25377 N 0.677
MLOC_52896 Hordeum vulgare MLOC_52896 I 0.676
mgf018056m Mimulus guttatus mgf018056m N 0.673
Pavir.Ia03786 Panicum virgatum Pavir.Ia03786 N 0.673
chr5.CM0071.390.nd Lotus japonicus chr5.CM0071.390.nd N 0.669
GLYMA09G04370 Glycine max GLYMA09G04370 I 0.667
PK22972.1 Cannabis sativa PK22972.1 N 0.667
OS05G0350900 Oryza sativa OS05G0350900 N 0.665
F775_20859 Aegilops tauschii F775_20859 N 0.663
GRMZM2G051528 Zea mays GRMZM2G051528 I 0.663
TRIUR3_33467 Triticum urartu TRIUR3_33467 N 0.661