PGSC0003DMG401010883 (Solanum tuberosum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PGSC0003DMG401010883 T277764_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400028225 Myb 1 19
PGSC0003DMT400028227 Myb 1 43
PGSC0003DMT400028230 Myb 1 43

Links

Other Myb/SANT family TFs
Other Solanum tuberosum TFs

134 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc06g005310.2 Solanum lycopersicum Solyc06g005310.2 N 0.909
ATMYB48 Arabidopsis thaliana AT3G46130 I 0.893
MYB59 Arabidopsis thaliana AT5G59780 D 0.893
cassava29437.valid.m1 Manihot esculenta cassava29437.valid.m1 N 0.893
Bostr.18473s0331 Boechera stricta Bostr.18473s0331 I 0.893
Cagra.10637s0001 Capsella grandiflora Cagra.10637s0001 I 0.893
Carubv10027237m.g Capsella rubella Carubv10027237m.g N 0.893
Eucgr.B02401 Eucalyptus grandis Eucgr.B02401 N 0.893
Gorai.001G107900 Gossypium raimondii Gorai.001G107900 I 0.893
Thhalv10002648m.g Eutrema salsugineum Thhalv10002648m.g I 0.893
Thhalv10014524m.g Eutrema salsugineum Thhalv10014524m.g I 0.893
Cucsa.213500 Cucumis sativus Cucsa.213500 I 0.889
MTR_4g063100 Medicago truncatula MTR_4g063100 I 0.887
GLYMA13G40830 Glycine max GLYMA13G40830 I 0.886
GLYMA15G04620 Glycine max GLYMA15G04620 I 0.886
PGSC0003DMG400015536 Solanum tuberosum PGSC0003DMG400015536 I 0.883
PGSC0003DMG400030397 Solanum tuberosum PGSC0003DMG400030397 N 0.875
Solyc06g075660.2 Solanum lycopersicum Solyc06g075660.2 N 0.875
Ca_16710 Cicer arietinum Ca_16710 N 0.875
cassava13590.valid.m1 Manihot esculenta cassava13590.valid.m1 N 0.875
MTR_2g096380 Medicago truncatula MTR_2g096380 I 0.871
Lus10040861.g Linum usitatissimum Lus10040861.g N 0.869
Eucgr.J02073 Eucalyptus grandis Eucgr.J02073 N 0.862
Gorai.013G265300 Gossypium raimondii Gorai.013G265300 I 0.853
MLOC_52439 Hordeum vulgare MLOC_52439 I 0.841
Traes_1BS_060C24872 Triticum aestivum Traes_1BS_060C24872 N 0.841
PGSC0003DMG402010883 Solanum tuberosum PGSC0003DMG402010883 N 0.834
Traes_7DS_76515C538 Triticum aestivum Traes_7DS_76515C538 N 0.834
Aquca_027_00267 Aquilegia coerulea Aquca_027_00267 N 0.833
POPTR_0017s10780 Populus trichocarpa POPTR_0017s10780 N 0.831
MLOC_39554 Hordeum vulgare MLOC_39554 I 0.830
Traes_7AS_ADDEF000C Triticum aestivum Traes_7AS_ADDEF000C N 0.830
GRMZM2G130149 Zea mays GRMZM2G130149 I 0.823
OB06G28240 Oryza brachyantha OB06G28240 N 0.823
Sb08g018580 Sorghum bicolor Sb08g018580 I 0.823
Si023104m.g Setaria italica Si023104m.g I 0.823
TCM_041010 Theobroma cacao TCM_041010 I 0.823
Traes_7AS_FD974A17F Triticum aestivum Traes_7AS_FD974A17F N 0.823
Eucgr.B03766 Eucalyptus grandis Eucgr.B03766 N 0.823
Pavir.Ca02588 Panicum virgatum Pavir.Ca02588 I 0.823
Pavir.Db00878 Panicum virgatum Pavir.Db00878 N 0.823
Pavir.J11500 Panicum virgatum Pavir.J11500 I 0.823
POPTR_0013s05310 Populus trichocarpa POPTR_0013s05310 I 0.820
Pm000007 Prunus mume Pm000007 N 0.820
Sb05g027370 Sorghum bicolor Sb05g027370 N 0.817
Si026803m.g Setaria italica Si026803m.g I 0.817
Pavir.Hb00058 Panicum virgatum Pavir.Hb00058 I 0.817
Pavir.J08441 Panicum virgatum Pavir.J08441 I 0.817
Pavir.J33560 Panicum virgatum Pavir.J33560 I 0.817
Cagra.5789s0001 Capsella grandiflora Cagra.5789s0001 N 0.815
PDK_20s1922781g001 Phoenix dactylifera PDK_20s1922781g001 N 0.815
SapurV1A.0040s0010 Salix purpurea SapurV1A.0040s0010 I 0.813
SapurV1A.0489s0220 Salix purpurea SapurV1A.0489s0220 I 0.813
chr1.CM0600.120.nd Lotus japonicus chr1.CM0600.120.nd N 0.813
cassava15703.m1 Manihot esculenta cassava15703.m1 N 0.811
mgf023771m Mimulus guttatus mgf023771m N 0.811
Cagra.0876s0043 Capsella grandiflora Cagra.0876s0043 N 0.811
LjSGA_014958.1 Lotus japonicus LjSGA_014958.1 N 0.811
LjSGA_057038.1 Lotus japonicus LjSGA_057038.1 N 0.811
LjSGA_057664.1 Lotus japonicus LjSGA_057664.1 N 0.811
LjSGA_034303.1 Lotus japonicus LjSGA_034303.1 N 0.808
MTR_1g087540 Medicago truncatula MTR_1g087540 N 0.800
BRADI4G09490 Brachypodium distachyon BRADI4G09490 N 0.799
MLOC_78504 Hordeum vulgare MLOC_78504 I 0.799
Ca_10215 Cicer arietinum Ca_10215 N 0.793
BRADI4G04050 Brachypodium distachyon BRADI4G04050 I 0.789
cassava45648.m1 Manihot esculenta cassava45648.m1 N 0.789
Pavir.Eb02286 Panicum virgatum Pavir.Eb02286 N 0.789
Pavir.J14839 Panicum virgatum Pavir.J14839 N 0.789
chr5.CM0071.390.nd Lotus japonicus chr5.CM0071.390.nd N 0.789
CM0385.220.nd Lotus japonicus CM0385.220.nd N 0.789
Bostr.13129s0196 Boechera stricta Bostr.13129s0196 I 0.784
Gorai.008G086400 Gossypium raimondii Gorai.008G086400 I 0.783
PK21717.1 Cannabis sativa PK21717.1 N 0.783
GLYMA12G07110 Glycine max GLYMA12G07110 I 0.781
Pavir.J25377 Panicum virgatum Pavir.J25377 N 0.776
mgf018056m Mimulus guttatus mgf018056m N 0.772
GRMZM2G048136 Zea mays GRMZM2G048136 I 0.768
GLYMA11G15180 Glycine max GLYMA11G15180 I 0.763
ORGLA02G0219000 Oryza glaberrima ORGLA02G0219000 N 0.762
F775_42755 Aegilops tauschii F775_42755 N 0.753
Bo8g104180 Brassica oleracea Bo8g104180 N 0.752
Bra024685 Brassica rapa Bra024685 N 0.744
Solyc03g098270.1 Solanum lycopersicum Solyc03g098270.1 N 0.744
fgenesh2_kg.397__1__AT3G24310.1 Arabidopsis lyrata fgenesh2_kg.397__1__AT3G24310.1 N 0.742
Thhalv10022197m.g Eutrema salsugineum Thhalv10022197m.g N 0.741
Traes_2DL_77F235694 Triticum aestivum Traes_2DL_77F235694 N 0.729
Pavir.Gb02200 Panicum virgatum Pavir.Gb02200 I 0.728
PGSC0003DMG400014550 Solanum tuberosum PGSC0003DMG400014550 I 0.726
MDP0000879675 Malus domestica MDP0000879675 N 0.726
mgf017705m Mimulus guttatus mgf017705m N 0.715
cassava2662.m1 Manihot esculenta cassava2662.m1 N 0.708
e_gw1.1.4.1 Physcomitrella patens e_gw1.1.4.1 N 0.708
mgf020736m Mimulus guttatus mgf020736m N 0.708
MYB3 Arabidopsis thaliana AT1G22640 D 0.704
MLOC_71332 Hordeum vulgare MLOC_71332 N 0.704
Traes_3AL_F09C7CA19 Triticum aestivum Traes_3AL_F09C7CA19 N 0.704
Traes_3DL_D9A29948B Triticum aestivum Traes_3DL_D9A29948B N 0.704
Pavir.Eb03517 Panicum virgatum Pavir.Eb03517 I 0.704
AMTR_s00009p00257950 Amborella trichopoda AMTR_s00009p00257950 N 0.700
OS04G0517100 Oryza sativa OS04G0517100 N 0.700
Ca_11427 Cicer arietinum Ca_11427 N 0.700
30072.m000986 Ricinus communis 30072.m000986 N 0.700
ATMYB16 Arabidopsis thaliana AT5G15310 I 0.699
Gorai.012G186500 Gossypium raimondii Gorai.012G186500 I 0.699
GLYMA09G04370 Glycine max GLYMA09G04370 I 0.694
AMTR_s00087p00039380 Amborella trichopoda AMTR_s00087p00039380 N 0.693
GRMZM2G001223 Zea mays GRMZM2G001223 I 0.693
evm.TU.supercontig_34.3 Carica papaya evm.TU.supercontig_34.3 N 0.693
MDP0000911051 Malus domestica MDP0000911051 N 0.693
LjT39N06.160.nd Lotus japonicus LjT39N06.160.nd N 0.688
AMTR_s00057p00069720 Amborella trichopoda AMTR_s00057p00069720 N 0.685
Bo4g198650 Brassica oleracea Bo4g198650 N 0.685
PK00358.1 Cannabis sativa PK00358.1 N 0.685
Ciclev10006469m.g Citrus clementina Ciclev10006469m.g N 0.683
PK16488.1 Cannabis sativa PK16488.1 N 0.683
MDP0000581761 Malus domestica MDP0000581761 N 0.681
Ciclev10023519m.g Citrus clementina Ciclev10023519m.g N 0.678
evm.TU.supercontig_1.55 Carica papaya evm.TU.supercontig_1.55 N 0.678
GRMZM2G051528 Zea mays GRMZM2G051528 I 0.675
PK22178.1 Cannabis sativa PK22178.1 N 0.675
BGIOSGA010548 Oryza indica BGIOSGA010548 N 0.671
OBART01G27550 Oryza barthii OBART01G27550 N 0.671
Traes_5AS_D238844BB Triticum aestivum Traes_5AS_D238844BB N 0.668
OS05G0132700 Oryza sativa OS05G0132700 N 0.666
Pavir.Eb00654 Panicum virgatum Pavir.Eb00654 I 0.666
MLOC_12474 Hordeum vulgare MLOC_12474 N 0.665
mgf018170m Mimulus guttatus mgf018170m N 0.665
OS05G0350900 Oryza sativa OS05G0350900 N 0.664
Traes_2AL_E2F8D46CE Triticum aestivum Traes_2AL_E2F8D46CE N 0.664
GLYMA03G41965 Glycine max GLYMA03G41965 N 0.661
GLYMA14G10483 Glycine max GLYMA14G10483 I 0.661
Gorai.011G122800 Gossypium raimondii Gorai.011G122800 I 0.661