CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400030397
(
Solanum tuberosum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
PGSC0003DMG400030397
T277716_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400078150
Myb
1
43
MTPQEELLVLQLHSKYGNRWSKIAGKLPGRTDNEIKNYWRTHM
PGSC0003DMT400078152
Myb
1
43
MTPQEELLVLQLHSKYGNRWSKIAGKLPGRTDNEIKNYWRTHM
Links
Other
Myb/SANT
family TFs
Other
Solanum tuberosum
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc06g075660.2
Solanum lycopersicum
Solyc06g075660.2
N
0.909
cassava29437.valid.m1
Manihot esculenta
cassava29437.valid.m1
N
0.883
ATMYB48
Arabidopsis thaliana
AT3G46130
I
0.883
Bostr.18473s0331
Boechera stricta
Bostr.18473s0331
I
0.883
cassava13590.valid.m1
Manihot esculenta
cassava13590.valid.m1
N
0.883
Carubv10027237m.g
Capsella rubella
Carubv10027237m.g
N
0.883
Thhalv10014524m.g
Eutrema salsugineum
Thhalv10014524m.g
I
0.883
Thhalv10002648m.g
Eutrema salsugineum
Thhalv10002648m.g
I
0.883
Gorai.001G107900
Gossypium raimondii
Gorai.001G107900
I
0.883
Eucgr.B02401
Eucalyptus grandis
Eucgr.B02401
N
0.883
Cagra.10637s0001
Capsella grandiflora
Cagra.10637s0001
I
0.883
Ca_16710
Cicer arietinum
Ca_16710
N
0.883
MYB59
Arabidopsis thaliana
AT5G59780
D
0.883
Cucsa.213500
Cucumis sativus
Cucsa.213500
I
0.879
Lus10040861.g
Linum usitatissimum
Lus10040861.g
N
0.877
MTR_4g063100
Medicago truncatula
MTR_4g063100
I
0.877
GLYMA15G04620
Glycine max
GLYMA15G04620
I
0.876
GLYMA13G40830
Glycine max
GLYMA13G40830
I
0.876
Solyc06g005310.2
Solanum lycopersicum
Solyc06g005310.2
N
0.875
PGSC0003DMG401010883
Solanum tuberosum
PGSC0003DMG401010883
N
0.875
PGSC0003DMG400015536
Solanum tuberosum
PGSC0003DMG400015536
I
0.873
Eucgr.J02073
Eucalyptus grandis
Eucgr.J02073
N
0.870
Gorai.013G265300
Gossypium raimondii
Gorai.013G265300
I
0.861
MTR_2g096380
Medicago truncatula
MTR_2g096380
I
0.861
Aquca_027_00267
Aquilegia coerulea
Aquca_027_00267
N
0.823
Traes_1BS_060C24872
Triticum aestivum
Traes_1BS_060C24872
N
0.815
MLOC_52439
Hordeum vulgare
MLOC_52439
I
0.815
PGSC0003DMG402010883
Solanum tuberosum
PGSC0003DMG402010883
N
0.808
SapurV1A.0489s0220
Salix purpurea
SapurV1A.0489s0220
I
0.802
SapurV1A.0040s0010
Salix purpurea
SapurV1A.0040s0010
I
0.802
BRADI4G09490
Brachypodium distachyon
BRADI4G09490
N
0.799
Sb08g018580
Sorghum bicolor
Sb08g018580
I
0.797
Pavir.Ca02588
Panicum virgatum
Pavir.Ca02588
I
0.797
Si023104m.g
Setaria italica
Si023104m.g
I
0.797
Pavir.J11500
Panicum virgatum
Pavir.J11500
I
0.797
GRMZM2G130149
Zea mays
GRMZM2G130149
I
0.797
Sb05g027370
Sorghum bicolor
Sb05g027370
N
0.791
Pavir.J33560
Panicum virgatum
Pavir.J33560
I
0.791
Pavir.Hb00058
Panicum virgatum
Pavir.Hb00058
I
0.791
Si026803m.g
Setaria italica
Si026803m.g
I
0.791
MLOC_78504
Hordeum vulgare
MLOC_78504
I
0.791
Pavir.J08441
Panicum virgatum
Pavir.J08441
I
0.791
GLYMA12G07110
Glycine max
GLYMA12G07110
I
0.781
GLYMA11G15180
Glycine max
GLYMA11G15180
I
0.763
BRADI4G04050
Brachypodium distachyon
BRADI4G04050
I
0.763
Thhalv10022197m.g
Eutrema salsugineum
Thhalv10022197m.g
N
0.751
GRMZM2G048136
Zea mays
GRMZM2G048136
I
0.742
fgenesh2_kg.397__1__AT3G24310.1
Arabidopsis lyrata
fgenesh2_kg.397__1__AT3G24310.1
N
0.742
Traes_2DL_77F235694
Triticum aestivum
Traes_2DL_77F235694
N
0.722
Pavir.Gb02200
Panicum virgatum
Pavir.Gb02200
I
0.702
Ca_11427
Cicer arietinum
Ca_11427
N
0.700
30072.m000986
Ricinus communis
30072.m000986
N
0.700
PK22178.1
Cannabis sativa
PK22178.1
N
0.683
MDP0000581761
Malus domestica
MDP0000581761
N
0.681
LjT39N06.160.nd
Lotus japonicus
LjT39N06.160.nd
N
0.680
PK16488.1
Cannabis sativa
PK16488.1
N
0.675
Ciclev10006469m.g
Citrus clementina
Ciclev10006469m.g
N
0.675
OBART01G27550
Oryza barthii
OBART01G27550
N
0.671
mgf018170m
Mimulus guttatus
mgf018170m
N
0.666
Gorai.004G064100
Gossypium raimondii
Gorai.004G064100
I
0.664
GLYMA03G41965
Glycine max
GLYMA03G41965
N
0.661