orange1.1g044161m.g (Citrus sinensis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 orange1.1g044161m.g T288922_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB59
M00883_2.00 		Arabidopsis thaliana
NKACCTAAYN
NRTTAGGTMN		 PBM
Franco-Zorrilla et al.(2014)
MYB59 		0.693 0.677
MYB27
M07097_2.00 		Arabidopsis thaliana
HHTACCTAAYTTWWN
NWWAARTTAGGTADD		 Dap-seq
OMalley et al.(2016)
MYB27_col_a 		0.688 0.720
MYB27
M07098_2.00 		Arabidopsis thaliana
NYHTACCTAAYTTWHN
NDWAARTTAGGTADRN		 Dap-seq
OMalley et al.(2016)
MYB27_colamp_a 		0.688 0.720
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g044161m Myb 8 55
orange1.1g044161m Myb 61 106

Links

Other Myb/SANT family TFs
Other Citrus sinensis TFs

155 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_92.99 Carica papaya evm.TU.supercontig_92.99 I 0.754
GSMUA_Achr11G24690_001 Musa acuminata GSMUA_Achr11G24690_001 I 0.748
AtMYB27 Vitis vinifera VIT_08s0007g04830 I 0.742
Bostr.9544s0002 Boechera stricta Bostr.9544s0002 I 0.731
Cagra.0612s0043 Capsella grandiflora Cagra.0612s0043 I 0.731
Carubv10019409m.g Capsella rubella Carubv10019409m.g I 0.731
PK10274.1 Cannabis sativa PK10274.1 I 0.727
GSMUA_Achr5G28350_001 Musa acuminata GSMUA_Achr5G28350_001 I 0.724
Gorai.009G413600 Gossypium raimondii Gorai.009G413600 I 0.722
Thhalv10010915m.g Eutrema salsugineum Thhalv10010915m.g I 0.720
GSMUA_Achr6G15370_001 Musa acuminata GSMUA_Achr6G15370_001 I 0.714
GSMUA_Achr10G13520_001 Musa acuminata GSMUA_Achr10G13520_001 I 0.713
GSMUA_Achr7G18200_001 Musa acuminata GSMUA_Achr7G18200_001 I 0.713
Bo7g033260 Brassica oleracea Bo7g033260 I 0.711
Bra015029 Brassica rapa Bra015029 I 0.711
BRADI2G62510 Brachypodium distachyon BRADI2G62510 I 0.709
OB01G54920 Oryza brachyantha OB01G54920 I 0.708
MYB305 Arabidopsis thaliana AT3G24310 I 0.707
Bo1g098860 Brassica oleracea Bo1g098860 I 0.707
Bo3g083130 Brassica oleracea Bo3g083130 I 0.707
Bra001941 Brassica rapa Bra001941 I 0.707
Bra028369 Brassica rapa Bra028369 I 0.707
fgenesh2_kg.3__2645__AT3G24310.1 Arabidopsis lyrata fgenesh2_kg.3__2645__AT3G24310.1 I 0.707
AtMYB27 Arabidopsis lyrata fgenesh2_kg.5__1687__AT3G53200.1 I 0.707
mgf004640m Mimulus guttatus mgf004640m I 0.707
Bostr.19424s0195 Boechera stricta Bostr.19424s0195 I 0.707
Cagra.0454s0003 Capsella grandiflora Cagra.0454s0003 I 0.707
Carubv10014367m.g Capsella rubella Carubv10014367m.g I 0.707
Thhalv10002634m.g Eutrema salsugineum Thhalv10002634m.g I 0.707
BGIOSGA005283 Oryza indica BGIOSGA005283 I 0.705
LPERR01G40120 Leersia perrieri LPERR01G40120 I 0.705
OBART01G45730 Oryza barthii OBART01G45730 I 0.705
OPUNC01G44650 Oryza punctata OPUNC01G44650 I 0.705
ORGLA01G0394700 Oryza glaberrima ORGLA01G0394700 I 0.705
ORUFI01G49220 Oryza rufipogon ORUFI01G49220 I 0.705
TCM_022293 Theobroma cacao TCM_022293 I 0.705
Bo6g067190 Brassica oleracea Bo6g067190 I 0.704
SapurV1A.0008s0950 Salix purpurea SapurV1A.0008s0950 I 0.702
Bra028550 Brassica rapa Bra028550 I 0.700
GLYMA05G35050 Glycine max GLYMA05G35050 I 0.694
ATMYB48 Arabidopsis thaliana AT3G46130 I 0.693
MYB59 Arabidopsis thaliana AT5G59780 D 0.693
Bo8g082570 Brassica oleracea Bo8g082570 I 0.693
Bra006977 Brassica rapa Bra006977 I 0.693
ATMYB48-1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5001097 I 0.693
MYB59 Arabidopsis lyrata fgenesh2_kg.8__1928__AT5G59780.3 I 0.693
TCM_041904 Theobroma cacao TCM_041904 I 0.693
Carubv10017875m.g Capsella rubella Carubv10017875m.g I 0.693
evm.TU.supercontig_190.35 Carica papaya evm.TU.supercontig_190.35 I 0.693
Lus10005886.g Linum usitatissimum Lus10005886.g I 0.693
orange1.1g023677m.g Citrus sinensis orange1.1g023677m.g I 0.693
SapurV1A.0008s0940 Salix purpurea SapurV1A.0008s0940 I 0.693
Thhalv10002648m.g Eutrema salsugineum Thhalv10002648m.g I 0.693
Thhalv10014524m.g Eutrema salsugineum Thhalv10014524m.g I 0.693
POPTR_0001s24220 Populus trichocarpa POPTR_0001s24220 I 0.690
29788.m000340 Ricinus communis 29788.m000340 I 0.690
cassava13589.valid.m1 Manihot esculenta cassava13589.valid.m1 I 0.690
Gorai.001G107900 Gossypium raimondii Gorai.001G107900 I 0.690
MYB27 Arabidopsis thaliana AT3G53200 D 0.688
cassava9891.m1 Manihot esculenta cassava9891.m1 I 0.688
Aquca_030_00038 Aquilegia coerulea Aquca_030_00038 I 0.688
Solyc05g053150.1 Solanum lycopersicum Solyc05g053150.1 I 0.686
GLYMA08G04670 Glycine max GLYMA08G04670 I 0.685
PRUPE_ppa016385mg Prunus persica PRUPE_ppa016385mg I 0.685
POPTR_0004s11720 Populus trichocarpa POPTR_0004s11720 I 0.683
TCM_018971 Theobroma cacao TCM_018971 I 0.683
Cucsa.379880 Cucumis sativus Cucsa.379880 I 0.683
Ciclev10013466m.g Citrus clementina Ciclev10013466m.g I 0.683
orange1.1g047854m.g Citrus sinensis orange1.1g047854m.g I 0.683
GSMUA_Achr10G03710_001 Musa acuminata GSMUA_Achr10G03710_001 I 0.681
Pm015392 Prunus mume Pm015392 I 0.681
Gorai.006G254200 Gossypium raimondii Gorai.006G254200 I 0.681
GLYMA10G26681 Glycine max GLYMA10G26681 I 0.680
GLYMA17G17560 Glycine max GLYMA17G17560 I 0.680
GLYMA20G20980 Glycine max GLYMA20G20980 I 0.680
OB11G27690 Oryza brachyantha OB11G27690 I 0.680
POPTR_0010s07450 Populus trichocarpa POPTR_0010s07450 I 0.680
Ca_07872 Cicer arietinum Ca_07872 I 0.680
Cagra.15509s0001 Capsella grandiflora Cagra.15509s0001 I 0.680
Carubv10007255m.g Capsella rubella Carubv10007255m.g I 0.680
Gorai.005G054900 Gossypium raimondii Gorai.005G054900 I 0.680
POPTR_0017s13370 Populus trichocarpa POPTR_0017s13370 I 0.678
Eucgr.I02057 Eucalyptus grandis Eucgr.I02057 I 0.678
MTR_1g045610 Medicago truncatula MTR_1g045610 I 0.677
PGSC0003DMG400001376 Solanum tuberosum PGSC0003DMG400001376 I 0.677
PGSC0003DMG400027202 Solanum tuberosum PGSC0003DMG400027202 I 0.677
PRUPE_ppa024234mg Prunus persica PRUPE_ppa024234mg I 0.677
Solyc02g089190.1 Solanum lycopersicum Solyc02g089190.1 I 0.677
Pm009050 Prunus mume Pm009050 I 0.677
cassava24463.valid.m1 Manihot esculenta cassava24463.valid.m1 I 0.677
Bostr.2021s0106 Boechera stricta Bostr.2021s0106 I 0.677
Eucgr.A01648 Eucalyptus grandis Eucgr.A01648 I 0.677
evm.TU.supercontig_59.23 Carica papaya evm.TU.supercontig_59.23 I 0.677
gene28293-v1.0-hybrid Fragaria vesca gene28293-v1.0-hybrid I 0.677
Gorai.006G073500 Gossypium raimondii Gorai.006G073500 I 0.677
SapurV1A.0096s0360 Salix purpurea SapurV1A.0096s0360 I 0.677
AtMYB79 Arabidopsis thaliana AT4G13480 I 0.676
fgenesh2_kg.9__1__AT4G13480.1 Arabidopsis lyrata fgenesh2_kg.9__1__AT4G13480.1 I 0.676
ATMYB121 Vitis vinifera VIT_14s0083g01060 I 0.675
MDP0000143156 Malus domestica MDP0000143156 I 0.674
Cla008413 Citrullus lanatus Cla008413 I 0.672
Cucsa.213500 Cucumis sativus Cucsa.213500 I 0.672
Lus10023711.g Linum usitatissimum Lus10023711.g I 0.672
F775_29427 Aegilops tauschii F775_29427 I 0.671
PGSC0003DMG400001504 Solanum tuberosum PGSC0003DMG400001504 I 0.671
Solyc09g090790.2 Solanum lycopersicum Solyc09g090790.2 I 0.671
Traes_3AL_A8AF980F3 Triticum aestivum Traes_3AL_A8AF980F3 I 0.671
TRAES3BF065400010CFD_g Triticum aestivum TRAES3BF065400010CFD_g I 0.671
TRIUR3_22432 Triticum urartu TRIUR3_22432 I 0.671
VIT_05s0049g02260 Vitis vinifera VIT_05s0049g02260 I 0.671
Ciclev10006914m.g Citrus clementina Ciclev10006914m.g I 0.671
orange1.1g047839m.g Citrus sinensis orange1.1g047839m.g I 0.671
Thhalv10005370m.g Eutrema salsugineum Thhalv10005370m.g I 0.671
Lus10005079.g Linum usitatissimum Lus10005079.g I 0.670
Lus10034372.g Linum usitatissimum Lus10034372.g I 0.670
Bo3g130340 Brassica oleracea Bo3g130340 I 0.669
Bra018223 Brassica rapa Bra018223 I 0.669
GLYMA13G40830 Glycine max GLYMA13G40830 I 0.669
GLYMA15G04620 Glycine max GLYMA15G04620 I 0.669
PRUPE_ppa015954mg Prunus persica PRUPE_ppa015954mg I 0.669
Pm000809 Prunus mume Pm000809 I 0.669
Gorai.003G136400 Gossypium raimondii Gorai.003G136400 I 0.669
MDP0000177010 Malus domestica MDP0000177010 I 0.669
MTR_4g063100 Medicago truncatula MTR_4g063100 I 0.667
Gorai.013G265300 Gossypium raimondii Gorai.013G265300 I 0.667
BGIOSGA035986 Oryza indica BGIOSGA035986 I 0.666
BRADI4G04050 Brachypodium distachyon BRADI4G04050 I 0.666
F775_06315 Aegilops tauschii F775_06315 I 0.666
GRMZM2G047626 Zea mays GRMZM2G047626 I 0.666
GRMZM2G130149 Zea mays GRMZM2G130149 I 0.666
LPERR12G13390 Leersia perrieri LPERR12G13390 I 0.666
MLOC_52439 Hordeum vulgare MLOC_52439 I 0.666
MTR_1g073170 Medicago truncatula MTR_1g073170 I 0.666
OB12G23080 Oryza brachyantha OB12G23080 I 0.666
ORGLA12G0141600 Oryza glaberrima ORGLA12G0141600 I 0.666
ORGLA12G0206100 Oryza glaberrima ORGLA12G0206100 I 0.666
ORUFI12G17930 Oryza rufipogon ORUFI12G17930 I 0.666
MYBAS2 Oryza sativa OS12G0567300 I 0.666
Sb08g018580 Sorghum bicolor Sb08g018580 I 0.666
Si023104m.g Setaria italica Si023104m.g I 0.666
TRIUR3_16862 Triticum urartu TRIUR3_16862 I 0.666
Cla013488 Citrullus lanatus Cla013488 I 0.666
Pavir.Ca02588 Panicum virgatum Pavir.Ca02588 I 0.666
Pavir.J11500 Panicum virgatum Pavir.J11500 I 0.666
MDP0000286143 Malus domestica MDP0000286143 I 0.665
GSMUA_Achr8G34340_001 Musa acuminata GSMUA_Achr8G34340_001 I 0.664
SapurV1A.0323s0160 Salix purpurea SapurV1A.0323s0160 I 0.664
Bo2g025410 Brassica oleracea Bo2g025410 I 0.663
Bra006694 Brassica rapa Bra006694 I 0.663
Bra020289 Brassica rapa Bra020289 I 0.663
Bo7g050560 Brassica oleracea Bo7g050560 I 0.662
Bra012482 Brassica rapa Bra012482 I 0.662
GSMUA_Achr8G02640_001 Musa acuminata GSMUA_Achr8G02640_001 I 0.662
gene09683-v1.0-hybrid Fragaria vesca gene09683-v1.0-hybrid I 0.662
Cucsa.238540 Cucumis sativus Cucsa.238540 I 0.661