Pavir.J12840 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.J12840 T289371_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J12840.1.p Myb 14 61
Pavir.J12840.1.p Myb 67 111

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Eb01225 Panicum virgatum Pavir.Eb01225 N 0.909
Pavir.Ea01343 Panicum virgatum Pavir.Ea01343 I 0.769
GRMZM2G051256 Zea mays GRMZM2G051256 I 0.728
29889.m003258 Ricinus communis 29889.m003258 I 0.692
Sb03g012550 Sorghum bicolor Sb03g012550 I 0.675
Si002107m.g Setaria italica Si002107m.g I 0.672
evm.TU.supercontig_18.16 Carica papaya evm.TU.supercontig_18.16 I 0.667
cassava34998.m1 Manihot esculenta cassava34998.m1 I 0.666