Bra039745 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra039745 T292702_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
anac028
M01289_2.00 		Arabidopsis thaliana
NTTGCGTRH
DYACGCAAN		 PBM
Lambert et al.(2019)
pTH9962 		0.974 0.991
anac028
M07179_2.00 		Arabidopsis thaliana
CTTSHNNHDCAMGYWA
TWRCKTGHDNNDSAAG		 Dap-seq
OMalley et al.(2016)
ANAC028_col_a 		0.974 0.991
PK19314.1
M01291_2.00 		Cannabis sativa
NNNNAMDNHW
WDNHKTNNNN		 PBM
Lambert et al.(2019)
pTH11252 		0.964 0.912
anac057
M07208_2.00 		Arabidopsis thaliana
TNCKTGHNNNDCAMGYH
DRCKTGHNNNDCAMGNA		 Dap-seq
OMalley et al.(2016)
ANAC057_col_a 		0.938 0.763
anac057
M07209_2.00 		Arabidopsis thaliana
WNCKTGHNNHDCAMGYHAYCD
HGRTDRCKTGHDNNDCAMGNW		 Dap-seq
OMalley et al.(2016)
ANAC057_colamp_a 		0.938 0.763
PK26618.1
M01292_2.00 		Cannabis sativa
NNYAMGHHA
TDDCKTRNN		 PBM
Lambert et al.(2019)
pTH11328 		0.935 0.798
NAC045
M07194_2.00 		Arabidopsis thaliana
TTNCTTSHNNNDCAMG
CKTGHNNNDSAAGNAA		 Dap-seq
OMalley et al.(2016)
ANAC045_col_a 		0.922 0.781
NAC045
M07195_2.00 		Arabidopsis thaliana
TTNCTTSHNNNDCAMG
CKTGHNNNDSAAGNAA		 Dap-seq
OMalley et al.(2016)
ANAC045_colamp_a 		0.922 0.781
ANAC020
M07178_2.00 		Arabidopsis thaliana
TTNCKTGHNNNDCAMGYHAHY
RDTDRCKTGHNNNDCAMGNAA		 Dap-seq
OMalley et al.(2016)
ANAC020_col_v31 		0.921 0.789
anac071
M07219_2.00 		Arabidopsis thaliana
CTTSHNNYHCAMGYW
WRCKTGDRNNDSAAG		 Dap-seq
OMalley et al.(2016)
ANAC071_col_a 		0.875 0.702
anac071
M07220_2.00 		Arabidopsis thaliana
CTTSHNNNNSAMGYA
TRCKTSNNNNDSAAG		 Dap-seq
OMalley et al.(2016)
ANAC071_colamp_a 		0.875 0.702
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra039745.1-P NAC/NAM 7 133

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

238 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo2g052630 Brassica oleracea Bo2g052630 I 0.975
Bostr.26959s0323 Boechera stricta Bostr.26959s0323 I 0.975
Cagra.11446s0003 Capsella grandiflora Cagra.11446s0003 I 0.975
Carubv10021788m.g Capsella rubella Carubv10021788m.g I 0.975
Thhalv10018275m.g Eutrema salsugineum Thhalv10018275m.g I 0.975
anac028 Arabidopsis lyrata Al_scaffold_0002_1137 I 0.974
anac028 Arabidopsis thaliana AT1G65910 D 0.974
GLYMA02G40750 Glycine max GLYMA02G40750 I 0.967
GLYMA14G39080 Glycine max GLYMA14G39080 I 0.967
mgf025206m Mimulus guttatus mgf025206m I 0.967
VIT_04s0079g00280 Vitis vinifera VIT_04s0079g00280 I 0.966
Cla009281 Citrullus lanatus Cla009281 I 0.966
Cucsa.173670 Cucumis sativus Cucsa.173670 I 0.966
Eucgr.F02910 Eucalyptus grandis Eucgr.F02910 I 0.966
MTR_3g064580 Medicago truncatula MTR_3g064580 I 0.965
TCM_017681 Theobroma cacao TCM_017681 I 0.965
evm.TU.supercontig_178.32 Carica papaya evm.TU.supercontig_178.32 I 0.965
POPTR_0017s02020 Populus trichocarpa POPTR_0017s02020 I 0.964
cassava38739.m1 Manihot esculenta cassava38739.m1 I 0.964
Gorai.007G188800 Gossypium raimondii Gorai.007G188800 I 0.964
SapurV1A.0549s0150 Salix purpurea SapurV1A.0549s0150 I 0.964
PK19314.1 Cannabis sativa PK19314.1 D 0.964
GLYMA11G33210 Glycine max GLYMA11G33210 I 0.963
Gorai.004G048200 Gossypium raimondii Gorai.004G048200 I 0.963
POPTR_0004s07910 Populus trichocarpa POPTR_0004s07910 I 0.962
PRUPE_ppa002384mg Prunus persica PRUPE_ppa002384mg I 0.962
Pm012993 Prunus mume Pm012993 I 0.962
30171.m000407 Ricinus communis 30171.m000407 I 0.962
gene31658-v1.0-hybrid Fragaria vesca gene31658-v1.0-hybrid I 0.962
BGIOSGA011734 Oryza indica BGIOSGA011734 I 0.961
BRADI1G77217 Brachypodium distachyon BRADI1G77217 I 0.961
LPERR03G01480 Leersia perrieri LPERR03G01480 I 0.961
OB03G11530 Oryza brachyantha OB03G11530 I 0.961
OBART03G01580 Oryza barthii OBART03G01580 I 0.961
OGLUM03G01540 Oryza glumaepatula OGLUM03G01540 I 0.961
OLONG_013792 Oryza longistaminata OLONG_013792 I 0.961
OMERI03G01540 Oryza meridionalis OMERI03G01540 I 0.961
ONIVA09G11670 Oryza nivara ONIVA09G11670 I 0.961
OPUNC03G01460 Oryza punctata OPUNC03G01460 I 0.961
ORGLA03G0013500 Oryza glaberrima ORGLA03G0013500 I 0.961
ORUFI03G01320 Oryza rufipogon ORUFI03G01320 I 0.961
OS03G0119966 Oryza sativa OS03G0119966 I 0.961
Ca_13258 Cicer arietinum Ca_13258 I 0.961
Lus10007377.g Linum usitatissimum Lus10007377.g I 0.961
SapurV1A.0147s0010 Salix purpurea SapurV1A.0147s0010 I 0.961
SapurV1A.1584s0060 Salix purpurea SapurV1A.1584s0060 I 0.961
cassava30278.valid.m1 Manihot esculenta cassava30278.valid.m1 I 0.960
Ciclev10011293m.g Citrus clementina Ciclev10011293m.g I 0.960
MDP0000520807 Malus domestica MDP0000520807 I 0.960
orange1.1g007938m.g Citrus sinensis orange1.1g007938m.g I 0.960
MTR_5g076850 Medicago truncatula MTR_5g076850 I 0.959
Aquca_002_01358 Aquilegia coerulea Aquca_002_01358 I 0.959
MDP0000276982 Malus domestica MDP0000276982 I 0.959
GLYMA18G05020 Glycine max GLYMA18G05020 I 0.958
Lus10020794.g Linum usitatissimum Lus10020794.g I 0.958
Pavir.Ia04558 Panicum virgatum Pavir.Ia04558 I 0.958
Pavir.Ib00051 Panicum virgatum Pavir.Ib00051 I 0.958
PDK_20s1433691g002 Phoenix dactylifera PDK_20s1433691g002 I 0.958
Solyc02g081270.2 Solanum lycopersicum Solyc02g081270.2 I 0.957
AMTR_s00044p00058960 Amborella trichopoda AMTR_s00044p00058960 I 0.956
PGSC0003DMG400021474 Solanum tuberosum PGSC0003DMG400021474 I 0.956
Solyc02g036430.1 Solanum lycopersicum Solyc02g036430.1 I 0.956
GSMUA_Achr8G13430_001 Musa acuminata GSMUA_Achr8G13430_001 I 0.955
Ca_14390 Cicer arietinum Ca_14390 I 0.953
GRMZM2G174070 Zea mays GRMZM2G174070 I 0.952
GRMZM2G406204 Zea mays GRMZM2G406204 I 0.952
Sb01g049240 Sorghum bicolor Sb01g049240 I 0.952
Si034541m.g Setaria italica Si034541m.g I 0.952
Eucgr.H00614 Eucalyptus grandis Eucgr.H00614 I 0.950
F775_22879 Aegilops tauschii F775_22879 I 0.948
MLOC_71128 Hordeum vulgare MLOC_71128 I 0.948
Traes_4BL_D592DBAAF Triticum aestivum Traes_4BL_D592DBAAF I 0.948
Traes_4DL_A13AE4BE6 Triticum aestivum Traes_4DL_A13AE4BE6 I 0.948
AMTR_s00037p00144010 Amborella trichopoda AMTR_s00037p00144010 I 0.947
GSMUA_Achr1G02820_001 Musa acuminata GSMUA_Achr1G02820_001 I 0.947
MTR_6g477900 Medicago truncatula MTR_6g477900 I 0.947
NAC086 Arabidopsis thaliana AT5G17260 I 0.946
Bo3g012450 Brassica oleracea Bo3g012450 I 0.945
Bra006392 Brassica rapa Bra006392 I 0.945
GSMUA_Achr9G23940_001 Musa acuminata GSMUA_Achr9G23940_001 I 0.942
POPTR_0010s18180 Populus trichocarpa POPTR_0010s18180 I 0.942
AMTR_s00149p00068500 Amborella trichopoda AMTR_s00149p00068500 I 0.941
Pm010926 Prunus mume Pm010926 I 0.941
cassava20891.m1 Manihot esculenta cassava20891.m1 I 0.941
Aquca_002_01357 Aquilegia coerulea Aquca_002_01357 I 0.941
MDP0000199840 Malus domestica MDP0000199840 I 0.941
MDP0000204582 Malus domestica MDP0000204582 I 0.941
AC233865.1_FG003 Zea mays AC233865.1_FG003 I 0.940
Bo9g161440 Brassica oleracea Bo9g161440 I 0.940
GSMUA_AchrUn_randomG08190_001 Musa acuminata GSMUA_AchrUn_randomG08190_001 I 0.940
Lus10026373.g Linum usitatissimum Lus10026373.g I 0.940
Lus10042284.g Linum usitatissimum Lus10042284.g I 0.940
Thhalv10013344m.g Eutrema salsugineum Thhalv10013344m.g I 0.940
OB09G25570 Oryza brachyantha OB09G25570 I 0.939
ANAC020 Vitis vinifera VIT_19s0085g00950 I 0.939
anac057 Arabidopsis lyrata Al_scaffold_0003_1866 I 0.938
anac057 Arabidopsis thaliana AT3G17730 D 0.938
BGIOSGA031229 Oryza indica BGIOSGA031229 I 0.938
Bo5g122710 Brassica oleracea Bo5g122710 I 0.938
Bra022236 Brassica rapa Bra022236 I 0.938
LPERR09G14740 Leersia perrieri LPERR09G14740 I 0.938
OGLUM09G19470 Oryza glumaepatula OGLUM09G19470 I 0.938
OMERI09G14160 Oryza meridionalis OMERI09G14160 I 0.938
ONIVA09G20110 Oryza nivara ONIVA09G20110 I 0.938
ORGLA09G0151700 Oryza glaberrima ORGLA09G0151700 I 0.938
OS09G0552800 Oryza sativa OS09G0552800 I 0.938
PGSC0003DMG400031054 Solanum tuberosum PGSC0003DMG400031054 I 0.938
Sb02g032220 Sorghum bicolor Sb02g032220 I 0.938
Si033085m.g Setaria italica Si033085m.g I 0.938
Solyc03g098190.2 Solanum lycopersicum Solyc03g098190.2 I 0.938
Cla018917 Citrullus lanatus Cla018917 I 0.938
cassava4611.m1 Manihot esculenta cassava4611.m1 I 0.938
Cucsa.112500 Cucumis sativus Cucsa.112500 I 0.938
mgf009479m Mimulus guttatus mgf009479m I 0.938
Bostr.19424s0897 Boechera stricta Bostr.19424s0897 I 0.938
Carubv10014426m.g Capsella rubella Carubv10014426m.g I 0.938
gene09293-v1.0-hybrid Fragaria vesca gene09293-v1.0-hybrid I 0.938
Gorai.006G189600 Gossypium raimondii Gorai.006G189600 I 0.938
Pavir.Bb02627 Panicum virgatum Pavir.Bb02627 I 0.938
Thhalv10021408m.g Eutrema salsugineum Thhalv10021408m.g I 0.938
GLYMA09G29760 Glycine max GLYMA09G29760 I 0.937
GLYMA16G34310 Glycine max GLYMA16G34310 I 0.937
Ca_18034 Cicer arietinum Ca_18034 I 0.937
30172.m000206 Ricinus communis 30172.m000206 I 0.937
Pavir.Ba01384 Panicum virgatum Pavir.Ba01384 I 0.937
Bostr.2618s0061 Boechera stricta Bostr.2618s0061 I 0.936
Lus10010959.g Linum usitatissimum Lus10010959.g I 0.936
PK26618.1 Cannabis sativa PK26618.1 D 0.935
GSMUA_Achr3G13880_001 Musa acuminata GSMUA_Achr3G13880_001 I 0.934
Cagra.4849s0008 Capsella grandiflora Cagra.4849s0008 I 0.934
Carubv10003869m.g Capsella rubella Carubv10003869m.g I 0.934
anac086 Arabidopsis lyrata fgenesh2_kg.6__1724__AT5G17260.1 I 0.933
29770.m000336 Ricinus communis 29770.m000336 I 0.933
SapurV1A.0074s0150 Salix purpurea SapurV1A.0074s0150 I 0.932
SapurV1A.2754s0020 Salix purpurea SapurV1A.2754s0020 I 0.932
TCM_044911 Theobroma cacao TCM_044911 I 0.930
Ca_23537 Cicer arietinum Ca_23537 I 0.930
TCM_033629 Theobroma cacao TCM_033629 I 0.929
Cla013653 Citrullus lanatus Cla013653 I 0.929
Cucsa.118620 Cucumis sativus Cucsa.118620 I 0.929
gene19716-v1.0-hybrid Fragaria vesca gene19716-v1.0-hybrid I 0.929
Gorai.013G146300 Gossypium raimondii Gorai.013G146300 I 0.928
chr2.CM0021.650.nc Lotus japonicus chr2.CM0021.650.nc I 0.928
GLYMA08G17351 Glycine max GLYMA08G17351 I 0.927
Bra003335 Brassica rapa Bra003335 I 0.926
F775_13960 Aegilops tauschii F775_13960 I 0.926
MLOC_37844 Hordeum vulgare MLOC_37844 I 0.926
Traes_5AL_59A8F0CBD Triticum aestivum Traes_5AL_59A8F0CBD I 0.926
Traes_5BL_581C3F5DA Triticum aestivum Traes_5BL_581C3F5DA I 0.926
TRIUR3_13806 Triticum urartu TRIUR3_13806 I 0.926
Bostr.6758s0078 Boechera stricta Bostr.6758s0078 I 0.926
Bo6g036040 Brassica oleracea Bo6g036040 I 0.925
GLYMA15G41825 Glycine max GLYMA15G41825 I 0.924
anac057 Populus trichocarpa POPTR_0012s03510 I 0.924
anac057 Vitis vinifera VIT_17s0053g00740 I 0.924
Ciclev10005341m.g Citrus clementina Ciclev10005341m.g I 0.924
Ciclev10024520m.g Citrus clementina Ciclev10024520m.g I 0.924
MDP0000387787 Malus domestica MDP0000387787 I 0.924
MDP0000656113 Malus domestica MDP0000656113 I 0.924
orange1.1g036998m.g Citrus sinensis orange1.1g036998m.g I 0.924
orange1.1g040617m.g Citrus sinensis orange1.1g040617m.g I 0.924
PK03341.1 Cannabis sativa PK03341.1 I 0.924
Cagra.1310s0016 Capsella grandiflora Cagra.1310s0016 I 0.923
Carubv10012163m.g Capsella rubella Carubv10012163m.g I 0.923
anac045 Arabidopsis lyrata Al_scaffold_0003_260 I 0.922
NAC045 Arabidopsis thaliana AT3G03200 D 0.922
Bo1g154830 Brassica oleracea Bo1g154830 I 0.922
Bo3g185870 Brassica oleracea Bo3g185870 I 0.922
Bo5g150170 Brassica oleracea Bo5g150170 I 0.922
Bra021366 Brassica rapa Bra021366 I 0.922
Bra030807 Brassica rapa Bra030807 I 0.922
Bra032009 Brassica rapa Bra032009 I 0.922
Bostr.19046s0031 Boechera stricta Bostr.19046s0031 I 0.922
Cagra.2098s0066 Capsella grandiflora Cagra.2098s0066 I 0.922
Carubv10013584m.g Capsella rubella Carubv10013584m.g I 0.922
Thhalv10022055m.g Eutrema salsugineum Thhalv10022055m.g I 0.922
Thhalv10027064m.g Eutrema salsugineum Thhalv10027064m.g I 0.922
ANAC020 Arabidopsis thaliana AT1G54330 D 0.921
POPTR_0015s05450 Populus trichocarpa POPTR_0015s05450 I 0.921
GSMUA_Achr11G01400_001 Musa acuminata GSMUA_Achr11G01400_001 I 0.920
MTR_2g064090 Medicago truncatula MTR_2g064090 I 0.919
ANAC020 Populus trichocarpa POPTR_0008s08100 I 0.919
evm.TU.supercontig_38.43 Carica papaya evm.TU.supercontig_38.43 I 0.919
ANAC020 Arabidopsis lyrata fgenesh2_kg.1__4648__AT1G54330.1 I 0.918
SapurV1A.0149s0500 Salix purpurea SapurV1A.0149s0500 I 0.918
Bra008567 Brassica rapa Bra008567 I 0.916
Gorai.001G070700 Gossypium raimondii Gorai.001G070700 I 0.916
SapurV1A.0202s0410 Salix purpurea SapurV1A.0202s0410 I 0.914
Aquca_044_00122 Aquilegia coerulea Aquca_044_00122 I 0.913
Cagra.1378s0012 Capsella grandiflora Cagra.1378s0012 I 0.911
Gorai.004G268400 Gossypium raimondii Gorai.004G268400 I 0.910
Thhalv10023058m.g Eutrema salsugineum Thhalv10023058m.g I 0.895
evm.TU.supercontig_26.135 Carica papaya evm.TU.supercontig_26.135 I 0.890
Eucgr.K02303 Eucalyptus grandis Eucgr.K02303 I 0.889
evm.TU.contig_29561 Carica papaya evm.TU.contig_29561 I 0.889
Ciclev10031966m.g Citrus clementina Ciclev10031966m.g I 0.887
orange1.1g018835m.g Citrus sinensis orange1.1g018835m.g I 0.887
VIT_02s0012g01040 Vitis vinifera VIT_02s0012g01040 I 0.886
Gorai.005G076200 Gossypium raimondii Gorai.005G076200 I 0.886
Ciclev10000612m.g Citrus clementina Ciclev10000612m.g I 0.885
Lus10035373.g Linum usitatissimum Lus10035373.g I 0.885
SapurV1A.0093s0260 Salix purpurea SapurV1A.0093s0260 I 0.885
LPERR09G14720 Leersia perrieri LPERR09G14720 I 0.884
PRUPE_ppa017765mg Prunus persica PRUPE_ppa017765mg I 0.884
Sb02g032230 Sorghum bicolor Sb02g032230 I 0.884
Gorai.009G260000 Gossypium raimondii Gorai.009G260000 I 0.884
BGIOSGA031230 Oryza indica BGIOSGA031230 I 0.883
OGLUM09G19480 Oryza glumaepatula OGLUM09G19480 I 0.883
OMERI09G14170 Oryza meridionalis OMERI09G14170 I 0.883
ONIVA09G20130 Oryza nivara ONIVA09G20130 I 0.883
ORGLA09G0151800 Oryza glaberrima ORGLA09G0151800 I 0.883
MLOC_37843 Hordeum vulgare MLOC_37843 I 0.882
OB09G25590 Oryza brachyantha OB09G25590 I 0.882
Traes_5BL_8BE382FE3 Triticum aestivum Traes_5BL_8BE382FE3 I 0.882
Traes_5DL_B69423A67 Triticum aestivum Traes_5DL_B69423A67 I 0.882
TRIUR3_13805 Triticum urartu TRIUR3_13805 I 0.882
cassava22941.valid.m1 Manihot esculenta cassava22941.valid.m1 I 0.882
Si032702m.g Setaria italica Si032702m.g I 0.881
Pavir.Ba01386 Panicum virgatum Pavir.Ba01386 I 0.881
Pavir.Bb02626 Panicum virgatum Pavir.Bb02626 I 0.881
VIT_18s0001g01820 Vitis vinifera VIT_18s0001g01820 I 0.880
GLYMA05G23840 Glycine max GLYMA05G23840 I 0.879
Lus10030978.g Linum usitatissimum Lus10030978.g I 0.878
GLYMA17G16500 Glycine max GLYMA17G16500 I 0.877
POPTR_0003s08830 Populus trichocarpa POPTR_0003s08830 I 0.877
29827.m002555 Ricinus communis 29827.m002555 I 0.877
Lus10028713.g Linum usitatissimum Lus10028713.g I 0.877
gene10722-v1.0-hybrid Fragaria vesca gene10722-v1.0-hybrid I 0.876
MDP0000936269 Malus domestica MDP0000936269 I 0.876
SapurV1A.0846s0080 Salix purpurea SapurV1A.0846s0080 I 0.876
anac071 Arabidopsis thaliana AT4G17980 D 0.875
cassava22173.valid.m1 Manihot esculenta cassava22173.valid.m1 I 0.875
Bostr.30275s0267 Boechera stricta Bostr.30275s0267 I 0.875
MDP0000852271 Malus domestica MDP0000852271 I 0.874
Eucgr.E00298 Eucalyptus grandis Eucgr.E00298 I 0.873
evm.TU.supercontig_90.52 Carica papaya evm.TU.supercontig_90.52 I 0.873
TCM_036587 Theobroma cacao TCM_036587 I 0.872
Cucsa.313350 Cucumis sativus Cucsa.313350 I 0.872