CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L892_g19201
(
Steinernema scapterisci
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
L892_g19201
T309224_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-3
M00687_2.00
Caenorhabditis elegans
NNHGDHYANN
NNTRDHCDNN
PBM
Narasimhan et al.(2015)
pTH9163
0.805
0.571
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L892_g19201.t1
Nuclear receptor
50
120
TTCAVCSDDREIGLHYGIPSCFGCKAFFRRTVREDKTYVCSKKGNCSIDKKCRNQCRACRYQMCLKKGMLL
Links
Other
Nuclear receptor
family TFs
Other
Steinernema scapterisci
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L596_g27130
Steinernema carpocapsae
L596_g27130
I
0.991
L889_g29246
Steinernema feltiae
L889_g29246
I
0.986
L898_g14928
Steinernema monticolum
L898_g14928
I
0.983
PPA20304
Pristionchus pacificus
PPA20304
I
0.828
GPLIN_000669000
Globodera pallida
GPLIN_000669000
I
0.827
Minc01725
Meloidogyne incognita
Minc01725
I
0.824
MhA1_Contig217.frz3.gene7
Meloidogyne hapla
MhA1_Contig217.frz3.gene7
I
0.824
maker-nMf.1.1.scaf07948-snap-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf07948-snap-gene-0.4
I
0.824
snap_masked-nMf.1.1.scaf18837-processed-gene-0.2
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf18837-processed-gene-0.2
I
0.824
Minc13525
Meloidogyne incognita
Minc13525
I
0.824
CJA13646
Caenorhabditis japonica
CJA13646
I
0.822
CBN19233
Caenorhabditis brenneri
CBN19233
I
0.809
nLs.2.1.2.g05858
Litomosoides sigmodontis
nLs.2.1.2.g05858
I
0.806
BTMF_0000273701
Brugia timori
BTMF_0000273701
I
0.805
nAv.1.0.1.g09896
Acanthocheilonema viteae
nAv.1.0.1.g09896
I
0.805
ANCCAN_18459
Ancylostoma caninum
ANCCAN_18459
I
0.805
WUBG_08518
Wuchereria bancrofti
WUBG_08518
I
0.805
ASU_10946
Ascaris suum
ASU_10946
I
0.805
CBG07552
Caenorhabditis briggsae
CBG07552
I
0.805
Bm14724
Brugia malayi
Bm14724
I
0.805
L596_g25666
Steinernema carpocapsae
L596_g25666
I
0.805
HCOI02077900
Haemonchus contortus
HCOI02077900
I
0.805
nOo.2.0.1.g05901
Onchocerca ochengi
nOo.2.0.1.g05901
I
0.805
OFLC_0000776201
Onchocerca flexuosa
OFLC_0000776201
I
0.805
TCNE_0001780601
Toxocara canis
TCNE_0001780601
I
0.805
NECAME_04545
Necator americanus
NECAME_04545
I
0.805
TELCIR_01879
Teladorsagia circumcincta
TELCIR_01879
I
0.805
nDi.2.2.2.g05078
Dirofilaria immitis
nDi.2.2.2.g05078
I
0.805
LOAG_18352
Loa loa
LOAG_18352
I
0.805
WBGene00241910
Onchocerca volvulus
WBGene00241910
I
0.805
CRE15289
Caenorhabditis remanei
CRE15289
I
0.805
L892_g650
Steinernema scapterisci
L892_g650
I
0.805
OESDEN_02943
Oesophagostomum dentatum
OESDEN_02943
I
0.805
nhr-3
Caenorhabditis elegans
WBGene00003602
D
0.805
SMUV_0000428701
Syphacia muris
SMUV_0000428701
I
0.803
TCLT_0000079701
Thelazia callipaeda
TCLT_0000079701
I
0.799
L893_g29555
Steinernema glaseri
L893_g29555
I
0.799
DICVIV_11945
Dictyocaulus viviparus
DICVIV_11945
I
0.797
ASIM_0001589901
Anisakis simplex
ASIM_0001589901
I
0.791
BXY_0011200
Bursaphelenchus xylophilus
BXY_0011200
I
0.772
DME_0000960901
Dracunculus medinensis
DME_0000960901
I
0.770
CBN20828
Caenorhabditis brenneri
CBN20828
I
0.770
CBN07936
Caenorhabditis brenneri
CBN07936
I
0.770
CRE06667
Caenorhabditis remanei
CRE06667
I
0.770
nhr-88
Caenorhabditis elegans
WBGene00003678
I
0.770
nOo.2.0.1.g04046
Onchocerca ochengi
nOo.2.0.1.g04046
I
0.757
nLs.2.1.2.g08709
Litomosoides sigmodontis
nLs.2.1.2.g08709
I
0.757
CJA04720
Caenorhabditis japonica
CJA04720
I
0.757
WUBG_10752
Wuchereria bancrofti
WUBG_10752
I
0.757
CBG19604
Caenorhabditis briggsae
CBG19604
I
0.757
TCLT_0000173501
Thelazia callipaeda
TCLT_0000173501
I
0.757
GPUH_0000393501
Gongylonema pulchrum
GPUH_0000393501
I
0.757
LOAG_05485
Loa loa
LOAG_05485
I
0.757
BTMF_0001198801
Brugia timori
BTMF_0001198801
I
0.757
nAv.1.0.1.g01698
Acanthocheilonema viteae
nAv.1.0.1.g01698
I
0.757
WBGene00248075
Onchocerca volvulus
WBGene00248075
I
0.757
nDi.2.2.2.g02781
Dirofilaria immitis
nDi.2.2.2.g02781
I
0.757
Bm4894
Brugia malayi
Bm4894
I
0.757
Bm12053
Brugia malayi
Bm12053
I
0.757
OFLC_0001511801
Onchocerca flexuosa
OFLC_0001511801
I
0.757
Hba_14163
Heterorhabditis bacteriophora
Hba_14163
I
0.753
ANCCAN_12539
Ancylostoma caninum
ANCCAN_12539
I
0.753
ACAC_0001180201
Angiostrongylus cantonensis
ACAC_0001180201
I
0.753
HCOI01268300
Haemonchus contortus
HCOI01268300
I
0.753
NBR_0000170601
Nippostrongylus brasiliensis
NBR_0000170601
I
0.753
NECAME_05125
Necator americanus
NECAME_05125
I
0.753
OESDEN_17109
Oesophagostomum dentatum
OESDEN_17109
I
0.753