L898_g23965 (Steinernema monticolum)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L898_g23965 T309469_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-7
M00689_2.00 		Caenorhabditis elegans
WAAGAYCAN
NTGRTCTTW		 PBM
Narasimhan et al.(2015)
pTH10645 		0.855 0.571
nhr-3
M00687_2.00 		Caenorhabditis elegans
NNHGDHYANN
NNTRDHCDNN		 PBM
Narasimhan et al.(2015)
pTH9163 		0.808 0.557
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L898_g23965.t1 Nuclear receptor 39 108

Links

Other Nuclear receptor family TFs
Other Steinernema monticolum TFs

95 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L596_g3812 Steinernema carpocapsae L596_g3812 I 0.991
L889_g6303 Steinernema feltiae L889_g6303 I 0.991
L893_g27196 Steinernema glaseri L893_g27196 I 0.991
L892_g21738 Steinernema scapterisci L892_g21738 I 0.989
ASIM_0001301101 Anisakis simplex ASIM_0001301101 I 0.957
ASU_01199 Ascaris suum ASU_01199 I 0.957
BXY_0740200 Bursaphelenchus xylophilus BXY_0740200 N 0.922
L889_g5777 Steinernema feltiae L889_g5777 I 0.921
SPAL_0000110800 Strongyloides papillosus SPAL_0000110800 I 0.920
SSTP_0001234400 Strongyloides stercoralis SSTP_0001234400 I 0.920
SVE_0137800 Strongyloides venezuelensis SVE_0137800 I 0.920
L596_g20569 Steinernema carpocapsae L596_g20569 I 0.918
L893_g29388 Steinernema glaseri L893_g29388 I 0.918
L898_g24498 Steinernema monticolum L898_g24498 I 0.918
SMUV_0000859101 Syphacia muris SMUV_0000859101 I 0.907
PEQ_0000633601 Parascaris equorum PEQ_0000633601 I 0.896
BXY_0008800 Bursaphelenchus xylophilus BXY_0008800 I 0.890
ACAC_0000409401 Angiostrongylus cantonensis ACAC_0000409401 I 0.878
HCOI00435200 Haemonchus contortus HCOI00435200 I 0.873
MhA1_Contig795.frz3.fgene1 Meloidogyne hapla MhA1_Contig795.frz3.fgene1 N 0.871
PTRK_0000497300 Parastrongyloides trichosuri PTRK_0000497300 I 0.869
CBN18797 Caenorhabditis brenneri CBN18797 I 0.860
CBN26258 Caenorhabditis brenneri CBN26258 I 0.860
CBG06052 Caenorhabditis briggsae CBG06052 I 0.855
nhr-7 Caenorhabditis elegans WBGene00003606 D 0.855
CRE12779 Caenorhabditis remanei CRE12779 I 0.854
ANCCEY_05105 Ancylostoma ceylanicum ANCCEY_05105 I 0.841
CBG19594 Caenorhabditis briggsae CBG19594 I 0.839
CBN31048 Caenorhabditis brenneri CBN31048 I 0.839
CRE06661 Caenorhabditis remanei CRE06661 I 0.839
ACAC_0000239001 Angiostrongylus cantonensis ACAC_0000239001 I 0.839
ACOC_0001326501 Angiostrongylus costaricensis ACOC_0001326501 I 0.839
ANCCEY_03357 Ancylostoma ceylanicum ANCCEY_03357 I 0.839
DICVIV_02348 Dictyocaulus viviparus DICVIV_02348 I 0.839
HCOI00769300 Haemonchus contortus HCOI00769300 I 0.839
HCOI01406200 Haemonchus contortus HCOI01406200 I 0.839
HPBE_0001043101 Heligmosomoides bakeri HPBE_0001043101 I 0.839
HPLM_0001680701 Haemonchus placei HPLM_0001680701 I 0.839
NBR_0001432001 Nippostrongylus brasiliensis NBR_0001432001 I 0.839
NECAME_12696 Necator americanus NECAME_12696 I 0.839
OESDEN_02652 Oesophagostomum dentatum OESDEN_02652 I 0.839
TELCIR_05080 Teladorsagia circumcincta TELCIR_05080 I 0.839
TELCIR_07363 Teladorsagia circumcincta TELCIR_07363 I 0.839
nhr-119 Caenorhabditis elegans WBGene00003709 I 0.837
Hba_14958 Heterorhabditis bacteriophora Hba_14958 I 0.833
ASIM_0001309901 Anisakis simplex ASIM_0001309901 I 0.823
DME_0000742401 Dracunculus medinensis DME_0000742401 I 0.813
SMUV_0000428701 Syphacia muris SMUV_0000428701 I 0.812
nLs.2.1.2.g05858 Litomosoides sigmodontis nLs.2.1.2.g05858 I 0.810
PTRK_0000510500 Parastrongyloides trichosuri PTRK_0000510500 I 0.809
SPAL_0001436300 Strongyloides papillosus SPAL_0001436300 I 0.809
SSTP_0000831700 Strongyloides stercoralis SSTP_0000831700 I 0.809
SVE_0301400 Strongyloides venezuelensis SVE_0301400 I 0.809
WUBG_08518 Wuchereria bancrofti WUBG_08518 I 0.808
Bm14724 Brugia malayi Bm14724 I 0.808
CBG07552 Caenorhabditis briggsae CBG07552 I 0.808
CBN19233 Caenorhabditis brenneri CBN19233 I 0.808
CJA13646 Caenorhabditis japonica CJA13646 I 0.808
CRE15289 Caenorhabditis remanei CRE15289 I 0.808
LOAG_18352 Loa loa LOAG_18352 I 0.808
nhr-3 Caenorhabditis elegans WBGene00003602 D 0.808
WBGene00241910 Onchocerca volvulus WBGene00241910 I 0.808
ANCCAN_18459 Ancylostoma caninum ANCCAN_18459 I 0.808
ASU_10946 Ascaris suum ASU_10946 I 0.808
BTMF_0000273701 Brugia timori BTMF_0000273701 I 0.808
HCOI02077900 Haemonchus contortus HCOI02077900 I 0.808
L893_g29555 Steinernema glaseri L893_g29555 I 0.808
nAv.1.0.1.g09896 Acanthocheilonema viteae nAv.1.0.1.g09896 I 0.808
nDi.2.2.2.g05078 Dirofilaria immitis nDi.2.2.2.g05078 I 0.808
NECAME_04545 Necator americanus NECAME_04545 I 0.808
nOo.2.0.1.g05901 Onchocerca ochengi nOo.2.0.1.g05901 I 0.808
OESDEN_02943 Oesophagostomum dentatum OESDEN_02943 I 0.808
OFLC_0000776201 Onchocerca flexuosa OFLC_0000776201 I 0.808
TCLT_0000079701 Thelazia callipaeda TCLT_0000079701 I 0.808
TCNE_0001780601 Toxocara canis TCNE_0001780601 I 0.808
TELCIR_01879 Teladorsagia circumcincta TELCIR_01879 I 0.808
L596_g25666 Steinernema carpocapsae L596_g25666 I 0.805
L892_g650 Steinernema scapterisci L892_g650 I 0.805
L889_g8361 Steinernema feltiae L889_g8361 I 0.802
ASIM_0001589901 Anisakis simplex ASIM_0001589901 I 0.800
L596_g25297 Steinernema carpocapsae L596_g25297 I 0.800
L898_g10316 Steinernema monticolum L898_g10316 I 0.800
BXY_1600300 Bursaphelenchus xylophilus BXY_1600300 I 0.787
GPLIN_000268400 Globodera pallida GPLIN_000268400 I 0.787
MhA1_Contig984.frz3.gene20 Meloidogyne hapla MhA1_Contig984.frz3.gene20 I 0.787
EVEC_0000349901 Enterobius vermicularis EVEC_0000349901 I 0.784
L893_g32432 Steinernema glaseri L893_g32432 I 0.776
PPA20304 Pristionchus pacificus PPA20304 I 0.772
BXY_0011200 Bursaphelenchus xylophilus BXY_0011200 I 0.761
Minc01725 Meloidogyne incognita Minc01725 I 0.759
Minc13525 Meloidogyne incognita Minc13525 I 0.759
maker-nMf.1.1.scaf07948-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf07948-snap-gene-0.4 I 0.759
MhA1_Contig217.frz3.gene7 Meloidogyne hapla MhA1_Contig217.frz3.gene7 I 0.759
snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 I 0.759
genemark-nMf.1.1.scaf00140-processed-gene-0.6 Meloidogyne floridensis genemark-nMf.1.1.scaf00140-processed-gene-0.6 I 0.754