LCUP015670 (Lucilia cuprina)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00292 (PAX) IPR001523 LCUP015670 T312241_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
pax2b
M02425_2.00 		Danio rerio
HVNYSRNSCR
YGSNYSRNBD		 PBM
Weirauch et al.(2014)
pTH8679 		0.786 0.786
Pax5B
M01301_2.00 		Gallus gallus
NSNDTNNNN
NNNNAHNSN		 PBM
Lambert et al.(2019)
pTH9781 		0.786 0.786
pax2
M02428_2.00 		Xenopus tropicalis
NNNRNBCRNN
NNYGVNYNNN		 PBM
Weirauch et al.(2014)
pTH8556 		0.786 0.786
PAX5
M03443_2.00 		Homo sapiens
RNBYANYSAWSCGTRACN
NGTYACGSWTSRNTRVNY		 SELEX
Jolma et al.(2013)
PAX5_1 		0.786 0.786
PAX5
M08160_2.00 		Homo sapiens
RDGCGTGACCNN
NNGGTCACGCHY		 ChIP-seq
Mathelier et al.(2014)
MA0014.3 		0.786 0.786
PAX5
M07995_2.00 		Homo sapiens
BCAVYSRDSCRKRRC
GYYMYGSHYSRBTGV		 ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5C20_HudsonAlpha 		0.786 0.786
PAX5
M07996_2.00 		Homo sapiens
BCASYSRDSCRTRAC
GTYAYGSHYSRSTGV		 ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5N19_HudsonAlpha 		0.786 0.786
PAX5
M07997_2.00 		Homo sapiens
CASYSRDSCRKRACN
NGTYMYGSHYSRSTG		 ChIP-seq
Gerstein et al.(2012)
GM12891_PAX5C20_HudsonAlpha 		0.786 0.786
PAX5
M07998_2.00 		Homo sapiens
BCASYSRDSCGKRRC
GYYMCGSHYSRSTGV		 ChIP-seq
Gerstein et al.(2012)
GM12892_PAX5C20_HudsonAlpha 		0.786 0.786
PAX5
M08227_2.00 		Homo sapiens
BCANYSRDGCGTRAM
KTYACGCHYSRNTGV		 ChIP-seq
Contrino et al.(2012)
Mv108 		0.786 0.786
PAX5
M08228_2.00 		Homo sapiens
AGCGTGRCYG
CRGYCACGCT		 ChIP-seq
Contrino et al.(2012)
Mv109 		0.786 0.786
PAX5
M09341_2.00 		Homo sapiens
SNVDGNKCARCVRAGCRDGAC
GTCHYGCTYBGYTGMNCHBNS		 Misc
Kulakovskiy et al.(2013)
PAX5_HUMAN.H11MO.0.A 		0.786 0.786
Pax5
M09342_2.00 		Mus musculus
VDRNBCAVYVRDSCRKRRM
KYYMYGSHYBRBTGVNYHB		 Misc
Kulakovskiy et al.(2013)
PAX5_MOUSE.H11MO.0.A 		0.786 0.786
PAX5
M09622_2.00 		Homo sapiens
BCASYSRDSCRTGRMN
NKYCAYGSHYSRSTGV		 Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_1 		0.786 0.786
PAX5
M09623_2.00 		Homo sapiens
BCABNVRSCGTGAC
GTCACGSYBNVTGV		 Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_2 		0.786 0.786
PAX5
M11208_2.00 		Homo sapiens
BCNNNRNKCANBGNWGNRKRGMSRSHNB
VNDSYSKCYMYNCWNCVNTGMNYNNNGV		 Transfac
Matys et al.(2006)
V$PAX5_01 		0.786 0.786
PAX5
M11209_2.00 		Homo sapiens
VRHVDGDNDBBTNRAGCGKRACVRYNVH
DBNRYBGTYMCGCTYNAVVHNHCHBDYB		 Transfac
Matys et al.(2006)
V$PAX5_02 		0.786 0.786
PAX5
M11210_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_06 		0.786 0.786
PAX5
M11211_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_07 		0.786 0.786
PAX5
M11212_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_Q6 		0.786 0.786
sv
M01302_2.00 		Drosophila melanogaster
NNNSCRBRDM
KHYVYGSNNN		 PBM
Lambert et al.(2019)
pTH9773 		0.768 0.768
sv
M03949_2.00 		Drosophila melanogaster
NBCRNYSAWGCGTGACS
SGTCACGCWTSRNYGVN		 SELEX
Nitta et al.(2015)
sv_1 		0.768 0.768
sv
M06438_2.00 		Drosophila melanogaster
RNYSRDSCGTRACNN
NNGTYACGSHYSRNY		 B1H
Zhu et al.(2011)
sv_SOLEXA_5_FBgn0005561 		0.768 0.768
PAX8
M05685_2.00 		Homo sapiens
NRNBYRNYSRWGCGTGACSN
NSGTCACGCWYSRNYRVNYN		 SELEX
Yin et al.(2017)
PAX8_FL_HT-SELEX 		0.732 0.732
Pax8
M09624_2.00 		Rattus norvegicus
BCAGBCADSCRKGVM
KBCMYGSHTGVCTGV		 Misc
Heinz et al.(2010)
Thyroid-Pax8_GSE26938 		0.732 0.732
PAX8
M11205_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX8_01 		0.732 0.732
PAX8
M11206_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX8_B 		0.732 0.732
PAX8
M05686_2.00 		Homo sapiens
NRNBCRNTSAWSCGYGACNN
NNGTCRCGSWTSANYGVNYN		 SELEX
Yin et al.(2017)
PAX8_FL_Methyl-HT-SELEX 		0.732 0.732
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LCUP015670-PA Paired box 20 75

Links

Other Paired box family TFs
Other Lucilia cuprina TFs

210 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HMEL002395 Heliconius melpomene HMEL002395 N 0.982
CLEC008846 Cimex lectularius CLEC008846 I 0.982
DAPPUDRAFT_38922 Daphnia pulex DAPPUDRAFT_38922 I 0.981
ACEP24464 Atta cephalotes ACEP24464 I 0.964
SPU_006786 Strongylocentrotus purpuratus SPU_006786 I 0.946
Cflo_05394--XP_001120031.1_APIME Camponotus floridanus Cflo_05394--XP_001120031.1_APIME I 0.929
BGLB007764 Biomphalaria glabrata BGLB007764 I 0.929
pax6b Danio rerio ENSDARG00000045936 I 0.929
LCUP013028 Lucilia cuprina LCUP013028 I 0.927
PAX6 Homo sapiens ENSG00000007372 D 0.914
WBGene00241130 Onchocerca volvulus WBGene00241130 I 0.875
ACOC_0000178201 Angiostrongylus costaricensis ACOC_0000178201 I 0.875
nAv.1.0.1.g05236 Acanthocheilonema viteae nAv.1.0.1.g05236 I 0.875
nDi.2.2.2.g03678 Dirofilaria immitis nDi.2.2.2.g03678 I 0.875
nOo.2.0.1.g04580 Onchocerca ochengi nOo.2.0.1.g04580 I 0.875
nLs.2.1.2.g01338 Litomosoides sigmodontis nLs.2.1.2.g01338 N 0.875
SSLN_0001115101 Schistocephalus solidus SSLN_0001115101 I 0.875
AMAM010937 Anopheles maculatus AMAM010937 I 0.875
TCLT_0000192601 Thelazia callipaeda TCLT_0000192601 N 0.875
D915_05709 Fasciola hepatica D915_05709 I 0.875
Bm14693 Brugia malayi Bm14693 I 0.875
SMTD_0001015101 Schistosoma mattheei SMTD_0001015101 N 0.857
SCUD_0000535601 Schistosoma curassoni SCUD_0000535601 I 0.857
L596_g12356 Steinernema carpocapsae L596_g12356 I 0.857
A_03128 Schistosoma haematobium A_03128 I 0.857
L889_g29910 Steinernema feltiae L889_g29910 I 0.857
L893_g1041 Steinernema glaseri L893_g1041 I 0.857
DME_0000186001 Dracunculus medinensis DME_0000186001 N 0.857
BGIBMGA009545 Bombyx mori BGIBMGA009545 I 0.841
EVEC_0000795701 Enterobius vermicularis EVEC_0000795701 I 0.839
ECANG7_07793 Echinococcus canadensis ECANG7_07793 I 0.821
CBG04481 Caenorhabditis briggsae CBG04481 I 0.821
ANCCEY_08417 Ancylostoma ceylanicum ANCCEY_08417 I 0.815
PAX5 Tupaia belangeri ENSTBEG00000007983 I 0.800
PAX5 Tursiops truncatus ENSTTRG00000006049 I 0.800
ENSTSYG00000008085 Tarsius syrichta ENSTSYG00000008085 I 0.800
ENSPFOG00000013202 Poecilia formosa ENSPFOG00000013202 I 0.786
PAX5 Procavia capensis ENSPCAG00000004660 I 0.786
ENSPFOG00000003702 Poecilia formosa ENSPFOG00000003702 I 0.786
ENSPPYG00000019064 Pongo abelii ENSPPYG00000019064 I 0.786
ENSPANG00000025475 Papio anubis ENSPANG00000025475 I 0.786
L892_g26455 Steinernema scapterisci L892_g26455 I 0.786
ENSSSCG00000005345 Sus scrofa ENSSSCG00000005345 I 0.786
Pax5 Rattus norvegicus ENSRNOG00000024729 I 0.786
ENSSTOG00000024354 Ictidomys tridecemlineatus ENSSTOG00000024354 I 0.786
PAX5 Taeniopygia guttata ENSTGUG00000007215 I 0.786
PAX5 Pteropus vampyrus ENSPVAG00000000054 I 0.786
PAX5 Pan troglodytes ENSPTRG00000020936 I 0.786
pax2a Takifugu rubripes ENSTRUG00000008891 I 0.786
Pvit_15554 Pogona vitticeps Pvit_15554 I 0.786
BGLB002028 Biomphalaria glabrata BGLB002028 I 0.786
XP_002935920 Xenopus tropicalis XP_002935920 I 0.786
pax2 Xenopus tropicalis XB-GENE-486801 D 0.786
LLOJ002076 Lutzomyia longipalpis LLOJ002076 I 0.786
L893_g8856 Steinernema glaseri L893_g8856 I 0.786
L889_g28670 Steinernema feltiae L889_g28670 I 0.786
L596_g7168 Steinernema carpocapsae L596_g7168 I 0.786
PAX5 Ochotona princeps ENSOPRG00000000734 I 0.786
Ogr18043 Ophisaurus gracilis Ogr18043 I 0.786
Brh_R001926 Buceros rhinoceros Brh_R001926 I 0.786
Afo_R005136 Aptenodytes forsteri Afo_R005136 I 0.786
ENSP00000350844-D1 Bos grunniens ENSP00000350844-D1 I 0.786
ENSP00000350844 Macaca fascicularis ENSP00000350844 I 0.786
Myotis_brandtii_PAX5_10017827 Myotis brandtii Myotis_brandtii_PAX5_10017827 I 0.786
Gfo_R013093 Geospiza fortis Gfo_R013093 I 0.786
Aan_R002178 Calypte anna Aan_R002178 I 0.786
ENSTSYG00000001117 Tarsius syrichta ENSTSYG00000001117 I 0.786
ENSONIG00000018496 Oreochromis niloticus ENSONIG00000018496 I 0.786
PAX5 Equus caballus ENSECAG00000000551 I 0.786
Pax5 Dipodomys ordii ENSDORG00000015818 I 0.786
pax2b Danio rerio ENSDARG00000032578 D 0.786
PAX5 Echinops telfairi ENSETEG00000002360 I 0.786
ENSFALG00000012983 Ficedula albicollis ENSFALG00000012983 I 0.786
Pax5B Gallus gallus ENSGALG00000016431 D 0.786
Pax-2 Gallus gallus ENSGALG00000005689 I 0.786
PAX5 Homo sapiens ENSG00000196092 D 0.786
PAX5 Felis catus ENSFCAG00000001628 I 0.786
pax2a Danio rerio ENSDARG00000028148 I 0.786
ENSCSAG00000010751 Chlorocebus sabaeus ENSCSAG00000010751 I 0.786
ENSAMEG00000010127 Ailuropoda melanoleuca ENSAMEG00000010127 I 0.786
ENSACAG00000011033 Anolis carolinensis ENSACAG00000011033 I 0.786
pax2.L Xenopus laevis XB-GENE-486805 I 0.786
PAX2 Homo sapiens ENSG00000075891 D 0.786
ENSAMXG00000005158 Astyanax mexicanus ENSAMXG00000005158 I 0.786
PAX5 Bos taurus ENSBTAG00000012498 I 0.786
PAX5 Cavia porcellus ENSCPOG00000009987 I 0.786
PAX5 Callithrix jacchus ENSCJAG00000010379 I 0.786
PAX5 Choloepus hoffmanni ENSCHOG00000003521 I 0.786
PAX5 Canis familiaris ENSCAFG00000002357 I 0.786
PAX5 Gorilla gorilla ENSGGOG00000003633 I 0.786
PAX5 Erinaceus europaeus ENSEEUG00000012531 I 0.786
ENSNLEG00000003664 Nomascus leucogenys ENSNLEG00000003664 I 0.786
PAX5 Ornithorhynchus anatinus ENSOANG00000007579 I 0.786
ENSOARG00000011518 Ovis aries ENSOARG00000011518 I 0.786
PAX5 Microcebus murinus ENSMICG00000017679 I 0.786
Pax5 Mus musculus ENSMUSG00000014030 D 0.786
ENSLACG00000013159 Latimeria chalumnae ENSLACG00000013159 I 0.786
PAX5 Myotis lucifugus ENSMLUG00000012652 I 0.786
PAX5 Monodelphis domestica ENSMODG00000002720 I 0.786
PAX5 Loxodonta africana ENSLAFG00000028851 I 0.786
ENSMPUG00000006012 Mustela putorius furo ENSMPUG00000006012 I 0.786
ENSOGAG00000004773 Otolemur garnettii ENSOGAG00000004773 I 0.786
PAX5 Oryctolagus cuniculus ENSOCUG00000012281 I 0.786
ENSONIG00000016065 Oreochromis niloticus ENSONIG00000016065 I 0.786
ANCDUO_03668 Ancylostoma duodenale ANCDUO_03668 N 0.768
DAPPUDRAFT_311028 Daphnia pulex DAPPUDRAFT_311028 I 0.768
ENSGMOG00000000463 Gadus morhua ENSGMOG00000000463 I 0.768
AGAP000057 Anopheles gambiae AGAP000057 I 0.768
CLEC006621 Cimex lectularius CLEC006621 I 0.768
ENSLOCG00000012825 Lepisosteus oculatus ENSLOCG00000012825 I 0.768
pax2b Oryzias latipes ENSORLG00000009321 I 0.768
ACEP12359 Atta cephalotes ACEP12359 I 0.768
ANCCAN_00243 Ancylostoma caninum ANCCAN_00243 I 0.768
ACHR009800 Anopheles christyi ACHR009800 I 0.768
PAX5 Anolis carolinensis ENSACAG00000011646 I 0.768
AMIN002123 Anopheles minimus AMIN002123 I 0.768
SVUK_0001011501 Strongylus vulgaris SVUK_0001011501 I 0.768
AMEM003247 Anopheles merus AMEM003247 I 0.768
AMEC016969 Anopheles melas AMEC016969 I 0.768
L898_g18055 Steinernema monticolum L898_g18055 I 0.768
ACUA027429 Anopheles culicifacies ACUA027429 I 0.768
AFUN011579 Anopheles funestus AFUN011579 I 0.768
EFV60539 Trichinella spiralis EFV60539 I 0.768
pax5.L Xenopus laevis XB-GENE-865318 I 0.768
spa-sv Drosophila pseudoobscura FBgn0249275 I 0.768
pax2a Gasterosteus aculeatus ENSGACG00000008391 I 0.768
MESCA003563 Megaselia scalaris MESCA003563 I 0.768
GF20618 Drosophila ananassae FBgn0097624 I 0.768
tetur29g01000 Tetranychus urticae tetur29g01000 I 0.768
pax5 Tetraodon nigroviridis ENSTNIG00000005085 I 0.768
GH23966 Drosophila grimshawi FBgn0131423 I 0.768
SINV11533 Solenopsis invicta SINV11533 I 0.768
GK13586 Drosophila willistoni FBgn0215594 I 0.768
YQE_12361 Dendroctonus ponderosae YQE_12361 I 0.768
SBAD_0001213701 Soboliphyme baturini SBAD_0001213701 I 0.768
ENSGMOG00000006294 Gadus morhua ENSGMOG00000006294 N 0.768
GI14046 Drosophila mojavensis FBgn0136800 I 0.768
GM13025 Drosophila sechellia FBgn0167956 I 0.768
GL18401 Drosophila persimilis FBgn0156002 I 0.768
GJ13730 Drosophila virilis FBgn0200951 I 0.768
pax2b Gasterosteus aculeatus ENSGACG00000002432 I 0.768
pax6a Danio rerio ENSDARG00000103379 I 0.757
DICVIV_04707 Dictyocaulus viviparus DICVIV_04707 I 0.750
pax2b Takifugu rubripes ENSTRUG00000011987 I 0.750
LOAG_00159 Loa loa LOAG_00159 I 0.750
SPAL_0000372000 Strongyloides papillosus SPAL_0000372000 I 0.750
ALUE_0001419501 Ascaris lumbricoides ALUE_0001419501 I 0.750
ACAC_0000893101 Angiostrongylus cantonensis ACAC_0000893101 I 0.750
HelroG124549 Helobdella robusta HelroG124549 I 0.750
Bm1956 Brugia malayi Bm1956 I 0.750
ADIR000964 Anopheles dirus ADIR000964 I 0.750
SVE_0227200 Strongyloides venezuelensis SVE_0227200 I 0.750
EVEC_0001357701 Enterobius vermicularis EVEC_0001357701 I 0.750
PTRK_0001603600 Parastrongyloides trichosuri PTRK_0001603600 I 0.750
GPUH_0000812501 Gongylonema pulchrum GPUH_0000812501 I 0.750
HPLM_0000491501 Haemonchus placei HPLM_0000491501 I 0.750
HCOI01205400 Haemonchus contortus HCOI01205400 I 0.750
nDi.2.2.2.g01404 Dirofilaria immitis nDi.2.2.2.g01404 I 0.750
PEQ_0001166701 Parascaris equorum PEQ_0001166701 I 0.750
TELCIR_10899 Teladorsagia circumcincta TELCIR_10899 I 0.750
SMUV_0000412301 Syphacia muris SMUV_0000412301 I 0.750
SSTP_0000522800 Strongyloides stercoralis SSTP_0000522800 I 0.750
EEL_0001009001 Elaeophora elaphi EEL_0001009001 I 0.750
ASU_03705 Ascaris suum ASU_03705 I 0.750
nLs.2.1.2.g05197 Litomosoides sigmodontis nLs.2.1.2.g05197 I 0.750
PAX8 Ochotona princeps ENSOPRG00000012910 I 0.732
LotgiG135549 Lottia gigantea LotgiG135549 I 0.732
PAX8 Felis catus ENSFCAG00000009580 I 0.732
Alligator_sinensis_CCG013279.1 Alligator sinensis Alligator_sinensis_CCG013279.1 I 0.732
Sakowv30025789m.g Saccoglossus kowalevskii Sakowv30025789m.g I 0.732
PAX8 Microcebus murinus ENSMICG00000003265 I 0.732
Ogr05570 Ophisaurus gracilis Ogr05570 I 0.732
PAX4 Echinops telfairi ENSETEG00000018729 N 0.732
ENSTRUG00000014051 Takifugu rubripes ENSTRUG00000014051 I 0.732
pax8.L Xenopus laevis XB-GENE-865008 I 0.732
NV12756 Nasonia vitripennis NV12756 I 0.732
RSKR_0000585500 Rhabditophanes kr3021 RSKR_0000585500 I 0.732
PAX8 Pan troglodytes ENSPTRG00000012380 I 0.732
OESDEN_18680 Oesophagostomum dentatum OESDEN_18680 I 0.727
L893_g11572 Steinernema glaseri L893_g11572 I 0.714
PXEA_0002614201 Protopolystoma xenopodis PXEA_0002614201 I 0.714
PXEA_0001769401 Protopolystoma xenopodis PXEA_0001769401 N 0.714
L798_15745 Zootermopsis nevadensis L798_15745 I 0.714
pax2a Tetraodon nigroviridis ENSTNIG00000008644 I 0.714
ENSPFOG00000019830 Poecilia formosa ENSPFOG00000019830 I 0.714
ENSTNIG00000013141 Tetraodon nigroviridis ENSTNIG00000013141 I 0.714
PAX8 Vicugna pacos ENSVPAG00000003973 I 0.714
LotgiG99097 Lottia gigantea LotgiG99097 I 0.714
ENSONIG00000000205 Oreochromis niloticus ENSONIG00000000205 I 0.714
ENSLACG00000003762 Latimeria chalumnae ENSLACG00000003762 I 0.714
CGI_10012686 Crassostrea gigas CGI_10012686 I 0.714
AGAP008818 Anopheles gambiae AGAP008818 I 0.714
ENSAMXG00000009227 Astyanax mexicanus ENSAMXG00000009227 I 0.714
pax8 Danio rerio ENSDARG00000015879 I 0.714
pax8 Gasterosteus aculeatus ENSGACG00000016747 I 0.714
RPRC011448 Rhodnius prolixus RPRC011448 N 0.714
LCUP005878 Lucilia cuprina LCUP005878 I 0.714
AMEM011238 Anopheles merus AMEM011238 I 0.714
AMEC005358 Anopheles melas AMEC005358 I 0.714
LLOJ000106 Lutzomyia longipalpis LLOJ000106 I 0.714
MDOA010966 Musca domestica MDOA010966 I 0.714
DILT_0000606101 Diphyllobothrium latum DILT_0000606101 N 0.714
AMAM005900 Anopheles maculatus AMAM005900 I 0.714
AFAF002012 Anopheles farauti AFAF002012 I 0.714
AALB001179 Anopheles albimanus AALB001179 I 0.714
Sjc_0077510 Schistosoma japonicum Sjc_0077510 I 0.714
AARA010781 Anopheles arabiensis AARA010781 I 0.714
AATE014886 Anopheles atroparvus AATE014886 I 0.714
ACOM039288 Anopheles coluzzii ACOM039288 I 0.714
L596_g23601 Steinernema carpocapsae L596_g23601 I 0.714