CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nLs.2.1.2.g01338
(
Litomosoides sigmodontis
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
nLs.2.1.2.g01338
T312831_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nLs.2.1.2.t01338-RA
Paired box
19
144
GHTGVNQLGGVFVNGRPLPDSTRQKIVDLAHQGARPCDISRILQVSNGCVSKILCRYYESGTIRPRAIGGSKPRVATVSVCDKIESYKREQPSIFAWEIRDKLLHEKVCSPDTIPSNDQLLHLSSL
Links
Other
Paired box
family TFs
Other
Litomosoides sigmodontis
TFs
79 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
WUBG_13045
Wuchereria bancrofti
WUBG_13045
I
0.959
OFLC_0001383501
Onchocerca flexuosa
OFLC_0001383501
I
0.959
EEL_0000889701
Elaeophora elaphi
EEL_0000889701
N
0.944
LOAG_04187
Loa loa
LOAG_04187
N
0.943
TCLT_0000192601
Thelazia callipaeda
TCLT_0000192601
N
0.936
Bm14693
Brugia malayi
Bm14693
I
0.928
WBGene00241130
Onchocerca volvulus
WBGene00241130
I
0.928
BTMF_0000869901
Brugia timori
BTMF_0000869901
N
0.928
nAv.1.0.1.g05236
Acanthocheilonema viteae
nAv.1.0.1.g05236
I
0.928
nDi.2.2.2.g03678
Dirofilaria immitis
nDi.2.2.2.g03678
I
0.928
nOo.2.0.1.g04580
Onchocerca ochengi
nOo.2.0.1.g04580
I
0.928
pax6a
Danio rerio
ENSDARG00000103379
I
0.914
ALUE_0000749601
Ascaris lumbricoides
ALUE_0000749601
N
0.912
ACAC_0001290301
Angiostrongylus cantonensis
ACAC_0001290301
I
0.911
ASU_08112
Ascaris suum
ASU_08112
N
0.911
DAPPUDRAFT_38922
Daphnia pulex
DAPPUDRAFT_38922
I
0.907
PEQ_0001140301
Parascaris equorum
PEQ_0001140301
N
0.904
DME_0000186001
Dracunculus medinensis
DME_0000186001
N
0.896
LCUP013028
Lucilia cuprina
LCUP013028
I
0.891
PAX6
Homo sapiens
ENSG00000007372
D
0.886
L596_g12356
Steinernema carpocapsae
L596_g12356
I
0.880
L893_g1041
Steinernema glaseri
L893_g1041
I
0.880
LCUP015670
Lucilia cuprina
LCUP015670
I
0.875
EVEC_0000795701
Enterobius vermicularis
EVEC_0000795701
I
0.872
L889_g29910
Steinernema feltiae
L889_g29910
I
0.872
AAC60302
Xenopus laevis
AAC60302
I
0.852
ANCCEY_08417
Ancylostoma ceylanicum
ANCCEY_08417
I
0.852
NECAME_04524
Necator americanus
NECAME_04524
I
0.824
TELCIR_00311
Teladorsagia circumcincta
TELCIR_00311
I
0.824
pax6b
Danio rerio
ENSDARG00000045936
I
0.821
PAX5
Tupaia belangeri
ENSTBEG00000007983
I
0.818
ENSTSYG00000008085
Tarsius syrichta
ENSTSYG00000008085
I
0.818
PAX5
Tursiops truncatus
ENSTTRG00000006049
I
0.818
OESDEN_18680
Oesophagostomum dentatum
OESDEN_18680
I
0.795
snap_masked-nMf.1.1.scaf10496-processed-gene-0.3
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf10496-processed-gene-0.3
N
0.795
BGIBMGA009545
Bombyx mori
BGIBMGA009545
I
0.794
HMEL009702
Heliconius melpomene
HMEL009702
I
0.793
CBG04481
Caenorhabditis briggsae
CBG04481
I
0.792
KGM_02181
Danaus plexippus
KGM_02181
I
0.792
Pax6
Mus musculus
ENSMUSG00000027168
D
0.787
ECPE_0000273501
Echinostoma caproni
ECPE_0000273501
I
0.787
RPRC003362
Rhodnius prolixus
RPRC003362
I
0.785
SINV17241
Solenopsis invicta
SINV17241
I
0.785
Ppa-vab-3
Pristionchus pacificus
PPA03442
I
0.784
scaffold478-EXSNAP2012.12
Pristionchus exspectatus
scaffold478-EXSNAP2012.12
I
0.784
LDEC008984
Leptinotarsa decemlineata
LDEC008984
I
0.783
pax6b
Gasterosteus aculeatus
ENSGACG00000016030
I
0.768
ACEP24464
Atta cephalotes
ACEP24464
I
0.768
Cflo_05394--XP_001120031.1_APIME
Camponotus floridanus
Cflo_05394--XP_001120031.1_APIME
I
0.768
CLEC008846
Cimex lectularius
CLEC008846
I
0.768
DAPPUDRAFT_122807
Daphnia pulex
DAPPUDRAFT_122807
I
0.766
ACEP20912
Atta cephalotes
ACEP20912
N
0.760
SPU_006786
Strongylocentrotus purpuratus
SPU_006786
I
0.760
Ocbimv22011111m.g
Octopus bimaculoides
Ocbimv22011111m.g
I
0.760
TRE_0000921601
Trichobilharzia regenti
TRE_0000921601
I
0.760
RPRC001429
Rhodnius prolixus
RPRC001429
I
0.756
YQE_05107
Dendroctonus ponderosae
YQE_05107
I
0.756
CLEC008733
Cimex lectularius
CLEC008733
I
0.755
PXEA_0001769401
Protopolystoma xenopodis
PXEA_0001769401
N
0.755
BGIBMGA009432
Bombyx mori
BGIBMGA009432
I
0.752
PHUM217120
Pediculus humanus
PHUM217120
I
0.752
ECPE_0001376401
Echinostoma caproni
ECPE_0001376401
I
0.750
BGLB007764
Biomphalaria glabrata
BGLB007764
I
0.744
D915_05709
Fasciola hepatica
D915_05709
I
0.744
nRc.2.0.1.g00894
Romanomermis culicivorax
nRc.2.0.1.g00894
I
0.744
SSLN_0001115101
Schistocephalus solidus
SSLN_0001115101
I
0.744
AATE019182
Anopheles atroparvus
AATE019182
I
0.738
ENSCSAVG00000007987
Ciona savignyi
ENSCSAVG00000007987
I
0.737
ENSMEUG00000011758
Macropus eugenii
ENSMEUG00000011758
I
0.737
SPER_0000208501
Spirometra erinaceieuropaei
SPER_0000208501
N
0.737
A_03128
Schistosoma haematobium
A_03128
I
0.728
nRc.2.0.1.g30341
Romanomermis culicivorax
nRc.2.0.1.g30341
I
0.728
SCUD_0000535601
Schistosoma curassoni
SCUD_0000535601
I
0.728
ACOM023323
Anopheles coluzzii
ACOM023323
I
0.726
Sjc_0004220
Schistosoma japonicum
Sjc_0004220
I
0.720
AMAM010937
Anopheles maculatus
AMAM010937
I
0.720
ANCCAN_01421
Ancylostoma caninum
ANCCAN_01421
I
0.720
DILT_0000442801
Diphyllobothrium latum
DILT_0000442801
I
0.712
HPBE_0000479901
Heligmosomoides bakeri
HPBE_0000479901
I
0.710