SSLN_0001115101 (Schistocephalus solidus)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00292 (PAX) IPR001523 SSLN_0001115101 T312942_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
pax2b
M02425_2.00 		Danio rerio
HVNYSRNSCR
YGSNYSRNBD		 PBM
Weirauch et al.(2014)
pTH8679 		0.710 0.710
Pax5B
M01301_2.00 		Gallus gallus
NSNDTNNNN
NNNNAHNSN		 PBM
Lambert et al.(2019)
pTH9781 		0.710 0.710
pax2
M02428_2.00 		Xenopus tropicalis
NNNRNBCRNN
NNYGVNYNNN		 PBM
Weirauch et al.(2014)
pTH8556 		0.710 0.710
PAX5
M03443_2.00 		Homo sapiens
RNBYANYSAWSCGTRACN
NGTYACGSWTSRNTRVNY		 SELEX
Jolma et al.(2013)
PAX5_1 		0.710 0.710
PAX5
M08160_2.00 		Homo sapiens
RDGCGTGACCNN
NNGGTCACGCHY		 ChIP-seq
Mathelier et al.(2014)
MA0014.3 		0.710 0.710
PAX5
M07995_2.00 		Homo sapiens
BCAVYSRDSCRKRRC
GYYMYGSHYSRBTGV		 ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5C20_HudsonAlpha 		0.710 0.710
PAX5
M07996_2.00 		Homo sapiens
BCASYSRDSCRTRAC
GTYAYGSHYSRSTGV		 ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5N19_HudsonAlpha 		0.710 0.710
PAX5
M07997_2.00 		Homo sapiens
CASYSRDSCRKRACN
NGTYMYGSHYSRSTG		 ChIP-seq
Gerstein et al.(2012)
GM12891_PAX5C20_HudsonAlpha 		0.710 0.710
PAX5
M07998_2.00 		Homo sapiens
BCASYSRDSCGKRRC
GYYMCGSHYSRSTGV		 ChIP-seq
Gerstein et al.(2012)
GM12892_PAX5C20_HudsonAlpha 		0.710 0.710
PAX5
M08227_2.00 		Homo sapiens
BCANYSRDGCGTRAM
KTYACGCHYSRNTGV		 ChIP-seq
Contrino et al.(2012)
Mv108 		0.710 0.710
PAX5
M08228_2.00 		Homo sapiens
AGCGTGRCYG
CRGYCACGCT		 ChIP-seq
Contrino et al.(2012)
Mv109 		0.710 0.710
PAX5
M09341_2.00 		Homo sapiens
SNVDGNKCARCVRAGCRDGAC
GTCHYGCTYBGYTGMNCHBNS		 Misc
Kulakovskiy et al.(2013)
PAX5_HUMAN.H11MO.0.A 		0.710 0.710
Pax5
M09342_2.00 		Mus musculus
VDRNBCAVYVRDSCRKRRM
KYYMYGSHYBRBTGVNYHB		 Misc
Kulakovskiy et al.(2013)
PAX5_MOUSE.H11MO.0.A 		0.710 0.710
PAX5
M09622_2.00 		Homo sapiens
BCASYSRDSCRTGRMN
NKYCAYGSHYSRSTGV		 Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_1 		0.710 0.710
PAX5
M09623_2.00 		Homo sapiens
BCABNVRSCGTGAC
GTCACGSYBNVTGV		 Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_2 		0.710 0.710
PAX5
M11208_2.00 		Homo sapiens
BCNNNRNKCANBGNWGNRKRGMSRSHNB
VNDSYSKCYMYNCWNCVNTGMNYNNNGV		 Transfac
Matys et al.(2006)
V$PAX5_01 		0.710 0.710
PAX5
M11209_2.00 		Homo sapiens
VRHVDGDNDBBTNRAGCGKRACVRYNVH
DBNRYBGTYMCGCTYNAVVHNHCHBDYB		 Transfac
Matys et al.(2006)
V$PAX5_02 		0.710 0.710
PAX5
M11210_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_06 		0.710 0.710
PAX5
M11211_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_07 		0.710 0.710
PAX5
M11212_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_Q6 		0.710 0.710
PAX8
M05685_2.00 		Homo sapiens
NRNBYRNYSRWGCGTGACSN
NSGTCACGCWYSRNYRVNYN		 SELEX
Yin et al.(2017)
PAX8_FL_HT-SELEX 		0.702 0.702
Pax8
M09624_2.00 		Rattus norvegicus
BCAGBCADSCRKGVM
KBCMYGSHTGVCTGV		 Misc
Heinz et al.(2010)
Thyroid-Pax8_GSE26938 		0.702 0.702
PAX8
M11205_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX8_01 		0.702 0.702
PAX8
M11206_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX8_B 		0.702 0.702
PAX8
M05686_2.00 		Homo sapiens
NRNBCRNTSAWSCGYGACNN
NNGTCRCGSWTSANYGVNYN		 SELEX
Yin et al.(2017)
PAX8_FL_Methyl-HT-SELEX 		0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SSLN_0001115101-mRNA-1 Paired box 6 130

Links

Other Paired box family TFs
Other Schistocephalus solidus TFs

202 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPER_0000208501 Spirometra erinaceieuropaei SPER_0000208501 N 0.939
pax6a Danio rerio ENSDARG00000103379 I 0.929
pax6b Danio rerio ENSDARG00000045936 I 0.922
DILT_0000606101 Diphyllobothrium latum DILT_0000606101 N 0.922
AAC60302 Xenopus laevis AAC60302 I 0.914
DAPPUDRAFT_38922 Daphnia pulex DAPPUDRAFT_38922 I 0.907
PXEA_0002614201 Protopolystoma xenopodis PXEA_0002614201 I 0.907
SCUD_0000535601 Schistosoma curassoni SCUD_0000535601 I 0.907
PXEA_0001769401 Protopolystoma xenopodis PXEA_0001769401 N 0.900
LCUP013028 Lucilia cuprina LCUP013028 I 0.891
PAX6 Homo sapiens ENSG00000007372 D 0.886
D915_05709 Fasciola hepatica D915_05709 I 0.885
ECPE_0000273501 Echinostoma caproni ECPE_0000273501 I 0.885
ECPE_0001376401 Echinostoma caproni ECPE_0001376401 I 0.879
LCUP015670 Lucilia cuprina LCUP015670 I 0.875
A_03128 Schistosoma haematobium A_03128 I 0.864
Pax6 Mus musculus ENSMUSG00000027168 D 0.857
Sjc_0004220 Schistosoma japonicum Sjc_0004220 I 0.856
TRE_0000921601 Trichobilharzia regenti TRE_0000921601 I 0.856
SINV17241 Solenopsis invicta SINV17241 I 0.851
RPRC003362 Rhodnius prolixus RPRC003362 I 0.843
KGM_02181 Danaus plexippus KGM_02181 I 0.842
LDEC008984 Leptinotarsa decemlineata LDEC008984 I 0.842
ACEP24464 Atta cephalotes ACEP24464 I 0.840
Ocbimv22011111m.g Octopus bimaculoides Ocbimv22011111m.g I 0.840
DILT_0000442801 Diphyllobothrium latum DILT_0000442801 I 0.840
HMEL009702 Heliconius melpomene HMEL009702 I 0.835
ACAC_0001290301 Angiostrongylus cantonensis ACAC_0001290301 I 0.835
ACOC_0000178201 Angiostrongylus costaricensis ACOC_0000178201 I 0.835
BGLB007764 Biomphalaria glabrata BGLB007764 I 0.831
pax6b Gasterosteus aculeatus ENSGACG00000016030 I 0.824
PHUM217120 Pediculus humanus PHUM217120 I 0.824
SPU_006786 Strongylocentrotus purpuratus SPU_006786 I 0.824
Cflo_05394--XP_001120031.1_APIME Camponotus floridanus Cflo_05394--XP_001120031.1_APIME I 0.823
CLEC008733 Cimex lectularius CLEC008733 I 0.811
YQE_05107 Dendroctonus ponderosae YQE_05107 I 0.805
CLEC006621 Cimex lectularius CLEC006621 I 0.804
AATE019182 Anopheles atroparvus AATE019182 I 0.803
ACEP20912 Atta cephalotes ACEP20912 N 0.800
PAX5 Tupaia belangeri ENSTBEG00000007983 I 0.800
ENSTSYG00000008085 Tarsius syrichta ENSTSYG00000008085 I 0.800
PAX5 Tursiops truncatus ENSTTRG00000006049 I 0.800
DAPPUDRAFT_122807 Daphnia pulex DAPPUDRAFT_122807 I 0.798
ACOM023323 Anopheles coluzzii ACOM023323 I 0.798
AMAM010937 Anopheles maculatus AMAM010937 I 0.798
RPRC001429 Rhodnius prolixus RPRC001429 I 0.797
ANCCEY_08417 Ancylostoma ceylanicum ANCCEY_08417 I 0.796
BGIBMGA009545 Bombyx mori BGIBMGA009545 I 0.794
nRc.2.0.1.g00894 Romanomermis culicivorax nRc.2.0.1.g00894 I 0.792
TTAC_0000709401 Hydatigera taeniaeformis TTAC_0000709401 I 0.792
ENSCSAVG00000007987 Ciona savignyi ENSCSAVG00000007987 I 0.789
SBAD_0001213701 Soboliphyme baturini SBAD_0001213701 I 0.786
BGIBMGA009432 Bombyx mori BGIBMGA009432 I 0.784
TASK_0000210301 Taenia asiatica TASK_0000210301 I 0.784
CLEC008846 Cimex lectularius CLEC008846 I 0.782
HDID_0000853801 Hymenolepis diminuta HDID_0000853801 N 0.779
OFLC_0001383501 Onchocerca flexuosa OFLC_0001383501 I 0.777
SMTD_0001015101 Schistosoma mattheei SMTD_0001015101 N 0.776
TsM_000804100 Taenia solium TsM_000804100 I 0.776
ECANG7_07793 Echinococcus canadensis ECANG7_07793 I 0.774
EVEC_0000795701 Enterobius vermicularis EVEC_0000795701 I 0.774
EmuJ_000389800 Echinococcus multilocularis EmuJ_000389800 I 0.768
HmN_000735200 Hymenolepis microstoma HmN_000735200 N 0.768
NECAME_04524 Necator americanus NECAME_04524 I 0.768
TELCIR_00311 Teladorsagia circumcincta TELCIR_00311 I 0.768
augustus_masked-nMf.1.1.scaf45992-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf45992-processed-gene-0.0 I 0.765
LOAG_04187 Loa loa LOAG_04187 N 0.764
WUBG_13045 Wuchereria bancrofti WUBG_13045 I 0.762
L889_g29910 Steinernema feltiae L889_g29910 I 0.760
L596_g12356 Steinernema carpocapsae L596_g12356 I 0.758
ENSMEUG00000011758 Macropus eugenii ENSMEUG00000011758 I 0.758
Bm14693 Brugia malayi Bm14693 I 0.752
Ppa-vab-3 Pristionchus pacificus PPA03442 I 0.752
WBGene00241130 Onchocerca volvulus WBGene00241130 I 0.752
BTMF_0000869901 Brugia timori BTMF_0000869901 N 0.752
DME_0000186001 Dracunculus medinensis DME_0000186001 N 0.752
L893_g1041 Steinernema glaseri L893_g1041 I 0.752
nAv.1.0.1.g05236 Acanthocheilonema viteae nAv.1.0.1.g05236 I 0.752
nDi.2.2.2.g03678 Dirofilaria immitis nDi.2.2.2.g03678 I 0.752
nOo.2.0.1.g04580 Onchocerca ochengi nOo.2.0.1.g04580 I 0.752
nRc.2.0.1.g30341 Romanomermis culicivorax nRc.2.0.1.g30341 I 0.752
scaffold478-EXSNAP2012.12 Pristionchus exspectatus scaffold478-EXSNAP2012.12 I 0.752
ASU_08112 Ascaris suum ASU_08112 N 0.750
EEL_0000889701 Elaeophora elaphi EEL_0000889701 N 0.750
OESDEN_18680 Oesophagostomum dentatum OESDEN_18680 I 0.750
TCLT_0000192601 Thelazia callipaeda TCLT_0000192601 N 0.750
HMEL002395 Heliconius melpomene HMEL002395 N 0.747
CBG04481 Caenorhabditis briggsae CBG04481 I 0.744
ALUE_0000749601 Ascaris lumbricoides ALUE_0000749601 N 0.744
nLs.2.1.2.g01338 Litomosoides sigmodontis nLs.2.1.2.g01338 N 0.744
SNAPOd2T00015306001 Oikopleura dioica SNAPOd2T00015306001 N 0.743
AALB001179 Anopheles albimanus AALB001179 I 0.743
PAX8 Vicugna pacos ENSVPAG00000003973 I 0.741
ENSTNIG00000013141 Tetraodon nigroviridis ENSTNIG00000013141 I 0.737
ANCDUO_03668 Ancylostoma duodenale ANCDUO_03668 N 0.737
PEQ_0001140301 Parascaris equorum PEQ_0001140301 N 0.736
MCINX012239 Melitaea cinxia MCINX012239 I 0.727
AARA010781 Anopheles arabiensis AARA010781 I 0.724
Sakowv30025789m.g Saccoglossus kowalevskii Sakowv30025789m.g I 0.720
HelroG124549 Helobdella robusta HelroG124549 I 0.719
LDEC006108 Leptinotarsa decemlineata LDEC006108 N 0.716
KGM_12316 Danaus plexippus KGM_12316 I 0.713
CGI_10024166 Crassostrea gigas CGI_10024166 I 0.712
pax2a Danio rerio ENSDARG00000028148 I 0.712
pax5 Danio rerio ENSDARG00000037383 I 0.712
pax2a Gasterosteus aculeatus ENSGACG00000008391 I 0.712
ENSGMOG00000012561 Gadus morhua ENSGMOG00000012561 I 0.712
ENSONIG00000018496 Oreochromis niloticus ENSONIG00000018496 I 0.712
ENSPFOG00000011719 Poecilia formosa ENSPFOG00000011719 I 0.712
ENSPFOG00000013202 Poecilia formosa ENSPFOG00000013202 I 0.712
pax5 Tetraodon nigroviridis ENSTNIG00000005085 I 0.712
pax5 Takifugu rubripes ENSTRUG00000003227 I 0.712
pax2a Takifugu rubripes ENSTRUG00000008891 I 0.712
ENSXMAG00000012680 Xiphophorus maculatus ENSXMAG00000012680 I 0.712
SPU_014539 Strongylocentrotus purpuratus SPU_014539 I 0.712
LCUP015671 Lucilia cuprina LCUP015671 N 0.712
Pax5 Dipodomys ordii ENSDORG00000015818 I 0.711
CapteG119889 Capitella teleta CapteG119889 I 0.710
ENSLACG00000013159 Latimeria chalumnae ENSLACG00000013159 I 0.710
HPBE_0000479901 Heligmosomoides bakeri HPBE_0000479901 I 0.710
ENSACAG00000011033 Anolis carolinensis ENSACAG00000011033 I 0.705
YQE_12361 Dendroctonus ponderosae YQE_12361 I 0.705
LCUP011945 Lucilia cuprina LCUP011945 I 0.705
ADIR011362 Anopheles dirus ADIR011362 I 0.705
AEPI004837 Anopheles epiroticus AEPI004837 I 0.705
PAX2 Homo sapiens ENSG00000075891 D 0.704
pax2.L Xenopus laevis XB-GENE-486805 I 0.704
ACYPI000633 Acyrthosiphon pisum ACYPI000633 I 0.704
DAPPUDRAFT_311028 Daphnia pulex DAPPUDRAFT_311028 I 0.704
ENSAMEG00000010127 Ailuropoda melanoleuca ENSAMEG00000010127 I 0.704
ENSAMXG00000005158 Astyanax mexicanus ENSAMXG00000005158 I 0.704
ENSAMXG00000012274 Astyanax mexicanus ENSAMXG00000012274 I 0.704
PAX5 Bos taurus ENSBTAG00000012498 I 0.704
PAX5 Canis familiaris ENSCAFG00000002357 I 0.704
PAX5 Choloepus hoffmanni ENSCHOG00000003521 I 0.704
PAX5 Callithrix jacchus ENSCJAG00000010379 I 0.704
PAX5 Cavia porcellus ENSCPOG00000009987 I 0.704
ENSCSAG00000010751 Chlorocebus sabaeus ENSCSAG00000010751 I 0.704
pax2b Danio rerio ENSDARG00000032578 D 0.704
PAX5 Equus caballus ENSECAG00000000551 I 0.704
PAX5 Erinaceus europaeus ENSEEUG00000012531 I 0.704
PAX5 Echinops telfairi ENSETEG00000002360 I 0.704
ENSFALG00000012983 Ficedula albicollis ENSFALG00000012983 I 0.704
PAX5 Felis catus ENSFCAG00000001628 I 0.704
PAX5 Homo sapiens ENSG00000196092 D 0.704
pax2b Gasterosteus aculeatus ENSGACG00000002432 I 0.704
pax5 Gasterosteus aculeatus ENSGACG00000016112 I 0.704
Pax-2 Gallus gallus ENSGALG00000005689 I 0.704
Pax5B Gallus gallus ENSGALG00000016431 D 0.704
PAX5 Gorilla gorilla ENSGGOG00000003633 I 0.704
PAX5 Loxodonta africana ENSLAFG00000028851 I 0.704
PAX5 Microcebus murinus ENSMICG00000017679 I 0.704
PAX5 Myotis lucifugus ENSMLUG00000012652 I 0.704
PAX5 Monodelphis domestica ENSMODG00000002720 I 0.704
ENSMPUG00000006012 Mustela putorius furo ENSMPUG00000006012 I 0.704
Pax5 Mus musculus ENSMUSG00000014030 D 0.704
ENSNLEG00000003664 Nomascus leucogenys ENSNLEG00000003664 I 0.704
PAX5 Ornithorhynchus anatinus ENSOANG00000007579 I 0.704
ENSOARG00000011518 Ovis aries ENSOARG00000011518 I 0.704
PAX5 Oryctolagus cuniculus ENSOCUG00000012281 I 0.704
ENSOGAG00000004773 Otolemur garnettii ENSOGAG00000004773 I 0.704
ENSONIG00000008952 Oreochromis niloticus ENSONIG00000008952 I 0.704
ENSONIG00000016065 Oreochromis niloticus ENSONIG00000016065 I 0.704
PAX5 Ochotona princeps ENSOPRG00000000734 I 0.704
pax5 Oryzias latipes ENSORLG00000005326 I 0.704
ENSPANG00000025475 Papio anubis ENSPANG00000025475 I 0.704
PAX5 Procavia capensis ENSPCAG00000004660 I 0.704
ENSPFOG00000003702 Poecilia formosa ENSPFOG00000003702 I 0.704
ENSPPYG00000019064 Pongo abelii ENSPPYG00000019064 I 0.704
PAX5 Pan troglodytes ENSPTRG00000020936 I 0.704
PAX5 Pteropus vampyrus ENSPVAG00000000054 I 0.704
ENSSSCG00000005345 Sus scrofa ENSSSCG00000005345 I 0.704
ENSSTOG00000024354 Ictidomys tridecemlineatus ENSSTOG00000024354 I 0.704
PAX5 Taeniopygia guttata ENSTGUG00000007215 I 0.704
pax2b Takifugu rubripes ENSTRUG00000011987 I 0.704
ENSTSYG00000001117 Tarsius syrichta ENSTSYG00000001117 I 0.704
ENSXMAG00000003038 Xiphophorus maculatus ENSXMAG00000003038 I 0.704
tetur29g01000 Tetranychus urticae tetur29g01000 I 0.704
Aan_R002178 Calypte anna Aan_R002178 I 0.704
Afo_R005136 Aptenodytes forsteri Afo_R005136 I 0.704
Brh_R001926 Buceros rhinoceros Brh_R001926 I 0.704
ENSP00000350844-D1 Bos grunniens ENSP00000350844-D1 I 0.704
ENSP00000350844 Macaca fascicularis ENSP00000350844 I 0.704
Gfo_R013093 Geospiza fortis Gfo_R013093 I 0.704
Myotis_brandtii_PAX5_10017827 Myotis brandtii Myotis_brandtii_PAX5_10017827 I 0.704
Pvit_15554 Pogona vitticeps Pvit_15554 I 0.704
pax2 Xenopus tropicalis XB-GENE-486801 D 0.704
pax8.L Xenopus laevis XB-GENE-865008 I 0.704
XP_002935920 Xenopus tropicalis XP_002935920 I 0.704
ENSPFOG00000023634 Poecilia formosa ENSPFOG00000023634 N 0.703
BGIBMGA013358 Bombyx mori BGIBMGA013358 I 0.702
PAX8 Microcebus murinus ENSMICG00000003265 I 0.702
PAX8 Ochotona princeps ENSOPRG00000012910 I 0.702
GH23966 Drosophila grimshawi FBgn0131423 I 0.702
GI14046 Drosophila mojavensis FBgn0136800 I 0.702
GL18401 Drosophila persimilis FBgn0156002 I 0.702
GJ13730 Drosophila virilis FBgn0200951 I 0.702
GK13586 Drosophila willistoni FBgn0215594 I 0.702
spa-sv Drosophila pseudoobscura FBgn0249275 I 0.702
MESCA003563 Megaselia scalaris MESCA003563 I 0.702
pax9.L Xenopus laevis XB-GENE-864845 I 0.702
AQUA004184 Anopheles quadriannulatus AQUA004184 I 0.701