scaffold_800157.1 (Arabidopsis lyrata)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04640 (PLATZ) IPR006734 scaffold_800157.1 T315679_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_800157.1 PLATZ 83 155

Links

Other PLATZ family TFs
Other Arabidopsis lyrata TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.28243s0064 Boechera stricta Bostr.28243s0064 N 0.918
Carubv10027053m.g Capsella rubella Carubv10027053m.g N 0.918
Cagra.0751s0029 Capsella grandiflora Cagra.0751s0029 N 0.904
AT5G46710 Arabidopsis thaliana AT5G46710 N 0.890
Bo7g075640 Brassica oleracea Bo7g075640 N 0.822
Bo7g105550 Brassica oleracea Bo7g105550 N 0.822
Bra025003 Brassica rapa Bra025003 N 0.822
Thhalv10001013m.g Eutrema salsugineum Thhalv10001013m.g N 0.822
AT4G17900 Arabidopsis thaliana AT4G17900 N 0.795
Bra013266 Brassica rapa Bra013266 N 0.795
fgenesh2_kg.7__2515__AT4G17900.1 Arabidopsis lyrata fgenesh2_kg.7__2515__AT4G17900.1 N 0.795
Bostr.30275s0258 Boechera stricta Bostr.30275s0258 N 0.795
Thhalv10026159m.g Eutrema salsugineum Thhalv10026159m.g N 0.795
Bo1g018010 Brassica oleracea Bo1g018010 N 0.781
Bra012632 Brassica rapa Bra012632 N 0.781
Bra021029 Brassica rapa Bra021029 N 0.781
Cagra.3356s0083 Capsella grandiflora Cagra.3356s0083 N 0.781
Carubv10005524m.g Capsella rubella Carubv10005524m.g N 0.781
Bo8g049810 Brassica oleracea Bo8g049810 N 0.767
Gorai.003G183000 Gossypium raimondii Gorai.003G183000 N 0.767
PGSC0003DMG400007670 Solanum tuberosum PGSC0003DMG400007670 N 0.753
PGSC0003DMG400017518 Solanum tuberosum PGSC0003DMG400017518 N 0.753
Solyc06g061240.2 Solanum lycopersicum Solyc06g061240.2 N 0.753
TCM_015701 Theobroma cacao TCM_015701 N 0.753
Gorai.004G184500 Gossypium raimondii Gorai.004G184500 N 0.753
Gorai.006G217100 Gossypium raimondii Gorai.006G217100 N 0.753
Lus10004577.g Linum usitatissimum Lus10004577.g N 0.753
PRUPE_ppa011266mg Prunus persica PRUPE_ppa011266mg N 0.750
Ciclev10012712m.g Citrus clementina Ciclev10012712m.g N 0.750
Gorai.008G226100 Gossypium raimondii Gorai.008G226100 N 0.750
Lus10000482.g Linum usitatissimum Lus10000482.g N 0.750
orange1.1g027730m.g Citrus sinensis orange1.1g027730m.g N 0.750
PGSC0003DMG400017849 Solanum tuberosum PGSC0003DMG400017849 N 0.740
Solyc08g076860.2 Solanum lycopersicum Solyc08g076860.2 N 0.740
mgf006925m Mimulus guttatus mgf006925m N 0.740
Gorai.007G032400 Gossypium raimondii Gorai.007G032400 N 0.740
Al_scaffold_0001_3341 Arabidopsis lyrata Al_scaffold_0001_3341 N 0.736
AT1G32700 Arabidopsis thaliana AT1G32700 N 0.736
PGSC0003DMG400009931 Solanum tuberosum PGSC0003DMG400009931 N 0.736
Pm023220 Prunus mume Pm023220 N 0.736
Bostr.3359s0088 Boechera stricta Bostr.3359s0088 N 0.736
Cagra.4962s0001 Capsella grandiflora Cagra.4962s0001 N 0.736
Carubv10009979m.g Capsella rubella Carubv10009979m.g N 0.736
Lus10030968.g Linum usitatissimum Lus10030968.g N 0.736
Lus10040082.g Linum usitatissimum Lus10040082.g N 0.736
Bra017531 Brassica rapa Bra017531 N 0.733
Bo8g028900 Brassica oleracea Bo8g028900 N 0.726
Bra023280 Brassica rapa Bra023280 N 0.726
Bra035494 Brassica rapa Bra035494 N 0.726
MTR_5g030130 Medicago truncatula MTR_5g030130 N 0.726
POPTR_0001s02390 Populus trichocarpa POPTR_0001s02390 N 0.726
PRUPE_ppa010445mg Prunus persica PRUPE_ppa010445mg N 0.726
Solyc08g005100.2 Solanum lycopersicum Solyc08g005100.2 N 0.726
VIT_18s0122g00320 Vitis vinifera VIT_18s0122g00320 N 0.726
Ca_12361 Cicer arietinum Ca_12361 N 0.726
Pm022874 Prunus mume Pm022874 N 0.726
30054.m000824 Ricinus communis 30054.m000824 N 0.726
cassava2216.valid.m1 Manihot esculenta cassava2216.valid.m1 N 0.726
cassava37607.valid.m1 Manihot esculenta cassava37607.valid.m1 N 0.726
mgf004069m Mimulus guttatus mgf004069m N 0.726
mgf010773m Mimulus guttatus mgf010773m N 0.726
MDP0000553473 Malus domestica MDP0000553473 N 0.726
MDP0000570901 Malus domestica MDP0000570901 N 0.726
Thhalv10008750m.g Eutrema salsugineum Thhalv10008750m.g N 0.726
PK14253.1 Cannabis sativa PK14253.1 N 0.726
LjSGA_028172.2 Lotus japonicus LjSGA_028172.2 N 0.726
GLYMA01G11390 Glycine max GLYMA01G11390 N 0.722
GLYMA08G36641 Glycine max GLYMA08G36641 N 0.722
MTR_8g066820 Medicago truncatula MTR_8g066820 N 0.722
POPTR_0003s09160 Populus trichocarpa POPTR_0003s09160 N 0.722
Aquca_005_00468 Aquilegia coerulea Aquca_005_00468 N 0.722
gene02186-v1.0-hybrid Fragaria vesca gene02186-v1.0-hybrid N 0.722
Lus10000952.g Linum usitatissimum Lus10000952.g N 0.722
Lus10002700.g Linum usitatissimum Lus10002700.g N 0.722
Lus10040292.g Linum usitatissimum Lus10040292.g N 0.722
Bo5g049240 Brassica oleracea Bo5g049240 N 0.712
Bo8g070540 Brassica oleracea Bo8g070540 N 0.712
GLYMA09G33770 Glycine max GLYMA09G33770 N 0.712
GRMZM2G086403 Zea mays GRMZM2G086403 N 0.712
GRMZM2G131280 Zea mays GRMZM2G131280 N 0.712
POPTR_0002s00430 Populus trichocarpa POPTR_0002s00430 N 0.712
XM_002306973.1 Populus trichocarpa POPTR_0005s28040 N 0.712
Cla008966 Citrullus lanatus Cla008966 N 0.712
30170.m013811 Ricinus communis 30170.m013811 N 0.712
cassava7406.valid.m1 Manihot esculenta cassava7406.valid.m1 N 0.712
Cucsa.321900 Cucumis sativus Cucsa.321900 N 0.712
mgf002787m Mimulus guttatus mgf002787m N 0.712
Aquca_095_00049 Aquilegia coerulea Aquca_095_00049 N 0.712
Lus10020337.g Linum usitatissimum Lus10020337.g N 0.712
orange1.1g025742m.g Citrus sinensis orange1.1g025742m.g N 0.712
SapurV1A.0151s0140 Salix purpurea SapurV1A.0151s0140 N 0.712
SapurV1A.0554s0100 Salix purpurea SapurV1A.0554s0100 N 0.712
SapurV1A.0555s0010 Salix purpurea SapurV1A.0555s0010 N 0.712
SapurV1A.1507s0030 Salix purpurea SapurV1A.1507s0030 N 0.712
SapurV1A.5427s0010 Salix purpurea SapurV1A.5427s0010 N 0.712
PK20928.1 Cannabis sativa PK20928.1 N 0.712
BGIOSGA005806 Oryza indica BGIOSGA005806 N 0.708
Bra025865 Brassica rapa Bra025865 N 0.708
GLYMA01G02180 Glycine max GLYMA01G02180 N 0.708
GRMZM2G091044 Zea mays GRMZM2G091044 N 0.708
GSMUA_Achr5G18120_001 Musa acuminata GSMUA_Achr5G18120_001 N 0.708
GSMUA_AchrUn_randomG24560_001 Musa acuminata GSMUA_AchrUn_randomG24560_001 N 0.708
LPERR02G23300 Leersia perrieri LPERR02G23300 N 0.708
OB02G35810 Oryza brachyantha OB02G35810 N 0.708
OBART02G28660 Oryza barthii OBART02G28660 N 0.708
OGLUM02G29250 Oryza glumaepatula OGLUM02G29250 N 0.708
OLONG_023395 Oryza longistaminata OLONG_023395 N 0.708
ONIVA02G31400 Oryza nivara ONIVA02G31400 N 0.708
OPUNC02G26310 Oryza punctata OPUNC02G26310 N 0.708
ORGLA02G0246600 Oryza glaberrima ORGLA02G0246600 N 0.708
ORUFI02G30220 Oryza rufipogon ORUFI02G30220 N 0.708
OS02G0692700 Oryza sativa OS02G0692700 N 0.708
Sb04g031230 Sorghum bicolor Sb04g031230 N 0.708
VIT_02s0012g01400 Vitis vinifera VIT_02s0012g01400 N 0.708
Ca_11505 Cicer arietinum Ca_11505 N 0.708
Cla016461 Citrullus lanatus Cla016461 N 0.708
Cucsa.313040 Cucumis sativus Cucsa.313040 N 0.708
Eucgr.D02206 Eucalyptus grandis Eucgr.D02206 N 0.708
Eucgr.E00276 Eucalyptus grandis Eucgr.E00276 N 0.708
MDP0000133007 Malus domestica MDP0000133007 N 0.708
MDP0000133008 Malus domestica MDP0000133008 N 0.708
MDP0000225862 Malus domestica MDP0000225862 N 0.708
Pavir.Aa01152 Panicum virgatum Pavir.Aa01152 N 0.708
Pavir.Ab01769 Panicum virgatum Pavir.Ab01769 N 0.708
SapurV1A.0016s0060 Salix purpurea SapurV1A.0016s0060 N 0.708
Thhalv10008598m.g Eutrema salsugineum Thhalv10008598m.g N 0.708