CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.28243s0064
(
Boechera stricta
)
PLATZ
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04640 (PLATZ)
IPR006734
Bostr.28243s0064
T315962_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.28243s0064.1.p
PLATZ
89
161
RISSYHNVIRVNEIQKYLDISSIQTYVINSAKVVFLNERPKPRPGKGFTNTCKVCDRGLAENCFSFCSIGCKV
Links
Other
PLATZ
family TFs
Other
Boechera stricta
TFs
206 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold_800157.1
Arabidopsis lyrata
scaffold_800157.1
N
0.918
Carubv10027053m.g
Capsella rubella
Carubv10027053m.g
N
0.918
Cagra.0751s0029
Capsella grandiflora
Cagra.0751s0029
N
0.904
Bo7g075640
Brassica oleracea
Bo7g075640
N
0.849
Bra025003
Brassica rapa
Bra025003
N
0.849
Thhalv10001013m.g
Eutrema salsugineum
Thhalv10001013m.g
N
0.849
AT5G46710
Arabidopsis thaliana
AT5G46710
N
0.836
Bo7g105550
Brassica oleracea
Bo7g105550
N
0.822
Bra012632
Brassica rapa
Bra012632
N
0.808
Gorai.003G183000
Gossypium raimondii
Gorai.003G183000
N
0.806
AT4G17900
Arabidopsis thaliana
AT4G17900
N
0.795
Bra013266
Brassica rapa
Bra013266
N
0.795
fgenesh2_kg.7__2515__AT4G17900.1
Arabidopsis lyrata
fgenesh2_kg.7__2515__AT4G17900.1
N
0.795
Bostr.30275s0258
Boechera stricta
Bostr.30275s0258
N
0.795
Thhalv10026159m.g
Eutrema salsugineum
Thhalv10026159m.g
N
0.795
TCM_015701
Theobroma cacao
TCM_015701
N
0.792
Lus10004577.g
Linum usitatissimum
Lus10004577.g
N
0.792
Bo1g018010
Brassica oleracea
Bo1g018010
N
0.781
PGSC0003DMG400007670
Solanum tuberosum
PGSC0003DMG400007670
N
0.781
Solyc06g061240.2
Solanum lycopersicum
Solyc06g061240.2
N
0.781
Cagra.3356s0083
Capsella grandiflora
Cagra.3356s0083
N
0.781
Carubv10005524m.g
Capsella rubella
Carubv10005524m.g
N
0.781
Gorai.004G184500
Gossypium raimondii
Gorai.004G184500
N
0.781
PGSC0003DMG400017518
Solanum tuberosum
PGSC0003DMG400017518
N
0.778
PGSC0003DMG400017849
Solanum tuberosum
PGSC0003DMG400017849
N
0.778
Ciclev10012712m.g
Citrus clementina
Ciclev10012712m.g
N
0.778
Gorai.006G217100
Gossypium raimondii
Gorai.006G217100
N
0.778
Gorai.007G032400
Gossypium raimondii
Gorai.007G032400
N
0.778
Gorai.008G226100
Gossypium raimondii
Gorai.008G226100
N
0.778
orange1.1g027730m.g
Citrus sinensis
orange1.1g027730m.g
N
0.778
Bra021029
Brassica rapa
Bra021029
N
0.767
mgf006925m
Mimulus guttatus
mgf006925m
N
0.767
MTR_4g078170
Medicago truncatula
MTR_4g078170
N
0.764
PRUPE_ppa011266mg
Prunus persica
PRUPE_ppa011266mg
N
0.764
Solyc08g005100.2
Solanum lycopersicum
Solyc08g005100.2
N
0.764
Solyc08g076860.2
Solanum lycopersicum
Solyc08g076860.2
N
0.764
Lus10000482.g
Linum usitatissimum
Lus10000482.g
N
0.764
Lus10020337.g
Linum usitatissimum
Lus10020337.g
N
0.764
Bo8g049810
Brassica oleracea
Bo8g049810
N
0.753
MTR_5g030130
Medicago truncatula
MTR_5g030130
N
0.750
PGSC0003DMG400009931
Solanum tuberosum
PGSC0003DMG400009931
N
0.750
POPTR_0001s02390
Populus trichocarpa
POPTR_0001s02390
N
0.750
PRUPE_ppa010445mg
Prunus persica
PRUPE_ppa010445mg
N
0.750
VIT_18s0122g00320
Vitis vinifera
VIT_18s0122g00320
N
0.750
Ca_12361
Cicer arietinum
Ca_12361
N
0.750
Pm022874
Prunus mume
Pm022874
N
0.750
Pm023220
Prunus mume
Pm023220
N
0.750
30054.m000824
Ricinus communis
30054.m000824
N
0.750
cassava2216.valid.m1
Manihot esculenta
cassava2216.valid.m1
N
0.750
cassava37607.valid.m1
Manihot esculenta
cassava37607.valid.m1
N
0.750
mgf002787m
Mimulus guttatus
mgf002787m
N
0.750
mgf004069m
Mimulus guttatus
mgf004069m
N
0.750
mgf010773m
Mimulus guttatus
mgf010773m
N
0.750
Lus10030968.g
Linum usitatissimum
Lus10030968.g
N
0.750
Lus10040082.g
Linum usitatissimum
Lus10040082.g
N
0.750
MDP0000553473
Malus domestica
MDP0000553473
N
0.750
MDP0000570901
Malus domestica
MDP0000570901
N
0.750
SapurV1A.0182s0280
Salix purpurea
SapurV1A.0182s0280
N
0.750
SapurV1A.1141s0070
Salix purpurea
SapurV1A.1141s0070
N
0.750
LjSGA_028172.2
Lotus japonicus
LjSGA_028172.2
N
0.750
PK14253.1
Cannabis sativa
PK14253.1
N
0.740
Al_scaffold_0001_3341
Arabidopsis lyrata
Al_scaffold_0001_3341
N
0.736
AT1G32700
Arabidopsis thaliana
AT1G32700
N
0.736
Bo8g028900
Brassica oleracea
Bo8g028900
N
0.736
Bra035494
Brassica rapa
Bra035494
N
0.736
BRADI3G52170
Brachypodium distachyon
BRADI3G52170
N
0.736
GLYMA01G44430
Glycine max
GLYMA01G44430
N
0.736
GLYMA08G36641
Glycine max
GLYMA08G36641
N
0.736
GLYMA09G33770
Glycine max
GLYMA09G33770
N
0.736
GLYMA11G01100
Glycine max
GLYMA11G01100
N
0.736
GLYMA12G01890
Glycine max
GLYMA12G01890
N
0.736
GRMZM2G131280
Zea mays
GRMZM2G131280
N
0.736
MTR_8g066820
Medicago truncatula
MTR_8g066820
N
0.736
POPTR_0002s00430
Populus trichocarpa
POPTR_0002s00430
N
0.736
POPTR_0003s09160
Populus trichocarpa
POPTR_0003s09160
N
0.736
XM_002306973.1
Populus trichocarpa
POPTR_0005s28040
N
0.736
POPTR_0013s07610
Populus trichocarpa
POPTR_0013s07610
N
0.736
POPTR_0019s07790
Populus trichocarpa
POPTR_0019s07790
N
0.736
TCM_025548
Theobroma cacao
TCM_025548
N
0.736
Ca_11235
Cicer arietinum
Ca_11235
N
0.736
Cla008966
Citrullus lanatus
Cla008966
N
0.736
30073.m002298
Ricinus communis
30073.m002298
N
0.736
30170.m013811
Ricinus communis
30170.m013811
N
0.736
cassava13685.valid.m1
Manihot esculenta
cassava13685.valid.m1
N
0.736
cassava22380.valid.m1
Manihot esculenta
cassava22380.valid.m1
N
0.736
cassava7406.valid.m1
Manihot esculenta
cassava7406.valid.m1
N
0.736
Cucsa.321900
Cucumis sativus
Cucsa.321900
N
0.736
Aquca_005_00468
Aquilegia coerulea
Aquca_005_00468
N
0.736
Aquca_095_00049
Aquilegia coerulea
Aquca_095_00049
N
0.736
Bostr.3359s0088
Boechera stricta
Bostr.3359s0088
N
0.736
Cagra.4962s0001
Capsella grandiflora
Cagra.4962s0001
N
0.736
Carubv10009979m.g
Capsella rubella
Carubv10009979m.g
N
0.736
gene02186-v1.0-hybrid
Fragaria vesca
gene02186-v1.0-hybrid
N
0.736
Lus10000952.g
Linum usitatissimum
Lus10000952.g
N
0.736
Lus10002700.g
Linum usitatissimum
Lus10002700.g
N
0.736
orange1.1g025742m.g
Citrus sinensis
orange1.1g025742m.g
N
0.736
orange1.1g026096m.g
Citrus sinensis
orange1.1g026096m.g
N
0.736
SapurV1A.0554s0100
Salix purpurea
SapurV1A.0554s0100
N
0.736
SapurV1A.0555s0010
Salix purpurea
SapurV1A.0555s0010
N
0.736
SapurV1A.1507s0030
Salix purpurea
SapurV1A.1507s0030
N
0.736
PK20928.1
Cannabis sativa
PK20928.1
N
0.736
chr1.CM0591.460.nd
Lotus japonicus
chr1.CM0591.460.nd
N
0.736
chr3.CM0127.220.nc
Lotus japonicus
chr3.CM0127.220.nc
N
0.736
Bra017531
Brassica rapa
Bra017531
N
0.733
Bra023280
Brassica rapa
Bra023280
N
0.726
evm.TU.supercontig_71.62
Carica papaya
evm.TU.supercontig_71.62
N
0.726
SapurV1A.0151s0140
Salix purpurea
SapurV1A.0151s0140
N
0.726
SapurV1A.5427s0010
Salix purpurea
SapurV1A.5427s0010
N
0.726
Thhalv10008750m.g
Eutrema salsugineum
Thhalv10008750m.g
N
0.726
BGIOSGA005806
Oryza indica
BGIOSGA005806
N
0.722
BGIOSGA014451
Oryza indica
BGIOSGA014451
N
0.722
Bo5g030950
Brassica oleracea
Bo5g030950
N
0.722
Bo5g049240
Brassica oleracea
Bo5g049240
N
0.722
Bra025865
Brassica rapa
Bra025865
N
0.722
F775_28196
Aegilops tauschii
F775_28196
N
0.722
GLYMA01G02180
Glycine max
GLYMA01G02180
N
0.722
GLYMA01G11390
Glycine max
GLYMA01G11390
N
0.722
GLYMA11G11640
Glycine max
GLYMA11G11640
N
0.722
GRMZM2G086403
Zea mays
GRMZM2G086403
N
0.722
GRMZM2G091044
Zea mays
GRMZM2G091044
N
0.722
GSMUA_Achr5G18120_001
Musa acuminata
GSMUA_Achr5G18120_001
N
0.722
GSMUA_Achr7G20650_001
Musa acuminata
GSMUA_Achr7G20650_001
N
0.722
GSMUA_AchrUn_randomG24560_001
Musa acuminata
GSMUA_AchrUn_randomG24560_001
N
0.722
LPERR02G23300
Leersia perrieri
LPERR02G23300
N
0.722
LPERR04G19240
Leersia perrieri
LPERR04G19240
N
0.722
MLOC_63157
Hordeum vulgare
MLOC_63157
N
0.722
MLOC_69202
Hordeum vulgare
MLOC_69202
N
0.722
OB02G35810
Oryza brachyantha
OB02G35810
N
0.722
OB04G30420
Oryza brachyantha
OB04G30420
N
0.722
OBART02G28660
Oryza barthii
OBART02G28660
N
0.722
OBART04G23520
Oryza barthii
OBART04G23520
N
0.722
OGLUM02G29250
Oryza glumaepatula
OGLUM02G29250
N
0.722
OGLUM04G23440
Oryza glumaepatula
OGLUM04G23440
N
0.722
OLONG_023395
Oryza longistaminata
OLONG_023395
N
0.722
ONIVA02G31400
Oryza nivara
ONIVA02G31400
N
0.722
ONIVA04G22750
Oryza nivara
ONIVA04G22750
N
0.722
OPUNC02G26310
Oryza punctata
OPUNC02G26310
N
0.722
OPUNC04G21040
Oryza punctata
OPUNC04G21040
N
0.722
ORGLA02G0246600
Oryza glaberrima
ORGLA02G0246600
N
0.722
ORGLA04G0200500
Oryza glaberrima
ORGLA04G0200500
N
0.722
ORUFI02G30220
Oryza rufipogon
ORUFI02G30220
N
0.722
ORUFI04G25190
Oryza rufipogon
ORUFI04G25190
N
0.722
OS02G0692700
Oryza sativa
OS02G0692700
N
0.722
OS04G0591100
Oryza sativa
OS04G0591100
N
0.722
Sb04g031230
Sorghum bicolor
Sb04g031230
N
0.722
Sb06g027000
Sorghum bicolor
Sb06g027000
N
0.722
Si010911m.g
Setaria italica
Si010911m.g
N
0.722
Si017318m.g
Setaria italica
Si017318m.g
N
0.722
Traes_2AL_74EFA5757
Triticum aestivum
Traes_2AL_74EFA5757
N
0.722
Traes_2BL_69847FCA6
Triticum aestivum
Traes_2BL_69847FCA6
N
0.722
TRIUR3_25489
Triticum urartu
TRIUR3_25489
N
0.722
VIT_02s0012g01400
Vitis vinifera
VIT_02s0012g01400
N
0.722
Ca_11505
Cicer arietinum
Ca_11505
N
0.722
Ca_11837
Cicer arietinum
Ca_11837
N
0.722
Cla016461
Citrullus lanatus
Cla016461
N
0.722
Cucsa.313040
Cucumis sativus
Cucsa.313040
N
0.722
fgenesh1_pg.scaffold_102000043
Physcomitrella patens
fgenesh1_pg.scaffold_102000043
N
0.722
Ciclev10002292m.g
Citrus clementina
Ciclev10002292m.g
N
0.722
Ciclev10032089m.g
Citrus clementina
Ciclev10032089m.g
N
0.722
Eucgr.D02206
Eucalyptus grandis
Eucgr.D02206
N
0.722
Eucgr.E00276
Eucalyptus grandis
Eucgr.E00276
N
0.722
evm.TU.supercontig_43.104
Carica papaya
evm.TU.supercontig_43.104
N
0.722
Gorai.003G056500
Gossypium raimondii
Gorai.003G056500
N
0.722
MDP0000133007
Malus domestica
MDP0000133007
N
0.722
MDP0000133008
Malus domestica
MDP0000133008
N
0.722
MDP0000225862
Malus domestica
MDP0000225862
N
0.722
Pavir.Aa01152
Panicum virgatum
Pavir.Aa01152
N
0.722
Pavir.Ab01769
Panicum virgatum
Pavir.Ab01769
N
0.722
Pavir.Ga00766
Panicum virgatum
Pavir.Ga00766
N
0.722
Pavir.Gb00818
Panicum virgatum
Pavir.Gb00818
N
0.722
SapurV1A.0016s0060
Salix purpurea
SapurV1A.0016s0060
N
0.722
Thhalv10008598m.g
Eutrema salsugineum
Thhalv10008598m.g
N
0.722
SapurV1A.1628s0020
Salix purpurea
SapurV1A.1628s0020
N
0.710
AMTR_s00002p00211460
Amborella trichopoda
AMTR_s00002p00211460
N
0.708
AT1G76590
Arabidopsis thaliana
AT1G76590
N
0.708
Bo6g120700
Brassica oleracea
Bo6g120700
N
0.708
Bo7g059750
Brassica oleracea
Bo7g059750
N
0.708
Bo8g070540
Brassica oleracea
Bo8g070540
N
0.708
Bra003715
Brassica rapa
Bra003715
N
0.708
Bra012263
Brassica rapa
Bra012263
N
0.708
Bra015731
Brassica rapa
Bra015731
N
0.708
Bra016441
Brassica rapa
Bra016441
N
0.708
GRMZM2G004548
Zea mays
GRMZM2G004548
N
0.708
GSMUA_Achr11G17810_001
Musa acuminata
GSMUA_Achr11G17810_001
N
0.708
GSMUA_Achr5G03420_001
Musa acuminata
GSMUA_Achr5G03420_001
N
0.708
GSMUA_Achr5G13970_001
Musa acuminata
GSMUA_Achr5G13970_001
N
0.708
scaffold_102351.1
Arabidopsis lyrata
scaffold_102351.1
N
0.708
TCM_034802
Theobroma cacao
TCM_034802
N
0.708
Traes_6DL_CF3557CFC
Triticum aestivum
Traes_6DL_CF3557CFC
N
0.708
TRIUR3_30366
Triticum urartu
TRIUR3_30366
N
0.708
VIT_16s0039g01560
Vitis vinifera
VIT_16s0039g01560
N
0.708
cassava13654.valid.m1
Manihot esculenta
cassava13654.valid.m1
N
0.708
e_gw1.1.253.1
Physcomitrella patens
e_gw1.1.253.1
N
0.708
e_gw1.6.367.1
Physcomitrella patens
e_gw1.6.367.1
N
0.708
estExt_gwp_gw1.C_1330066
Physcomitrella patens
estExt_gwp_gw1.C_1330066
N
0.708
Bostr.20129s0097
Boechera stricta
Bostr.20129s0097
N
0.708
Bostr.7128s0691
Boechera stricta
Bostr.7128s0691
N
0.708
Cagra.2281s0027
Capsella grandiflora
Cagra.2281s0027
N
0.708
Cagra.7414s0001
Capsella grandiflora
Cagra.7414s0001
N
0.708
Carubv10009696m.g
Capsella rubella
Carubv10009696m.g
N
0.708
Carubv10020852m.g
Capsella rubella
Carubv10020852m.g
N
0.708
Eucgr.F01950
Eucalyptus grandis
Eucgr.F01950
N
0.708
Eucgr.F03621
Eucalyptus grandis
Eucgr.F03621
N
0.708
Gorai.013G184000
Gossypium raimondii
Gorai.013G184000
N
0.708
Lus10040292.g
Linum usitatissimum
Lus10040292.g
N
0.708
Thhalv10019067m.g
Eutrema salsugineum
Thhalv10019067m.g
N
0.708