Bra017531 (Brassica rapa)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04640 (PLATZ) IPR006734 Bra017531 T315275_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra017531.1-P PLATZ 90 164

Links

Other PLATZ family TFs
Other Brassica rapa TFs

177 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo9g065480 Brassica oleracea Bo9g065480 N 0.947
Bo7g075640 Brassica oleracea Bo7g075640 N 0.853
Bra025003 Brassica rapa Bra025003 N 0.853
Thhalv10001013m.g Eutrema salsugineum Thhalv10001013m.g N 0.853
Bo1g018010 Brassica oleracea Bo1g018010 N 0.836
AT4G17900 Arabidopsis thaliana AT4G17900 N 0.836
Bo7g105550 Brassica oleracea Bo7g105550 N 0.827
Bra013266 Brassica rapa Bra013266 N 0.827
Bo8g049810 Brassica oleracea Bo8g049810 N 0.822
AT1G32700 Arabidopsis thaliana AT1G32700 N 0.819
Bostr.3359s0088 Boechera stricta Bostr.3359s0088 N 0.819
Al_scaffold_0001_3341 Arabidopsis lyrata Al_scaffold_0001_3341 N 0.819
Cagra.4962s0001 Capsella grandiflora Cagra.4962s0001 N 0.819
Carubv10009979m.g Capsella rubella Carubv10009979m.g N 0.819
Bostr.30275s0258 Boechera stricta Bostr.30275s0258 N 0.813
Bra012632 Brassica rapa Bra012632 N 0.813
fgenesh2_kg.7__2515__AT4G17900.1 Arabidopsis lyrata fgenesh2_kg.7__2515__AT4G17900.1 N 0.813
Thhalv10026159m.g Eutrema salsugineum Thhalv10026159m.g N 0.813
Gorai.008G226100 Gossypium raimondii Gorai.008G226100 N 0.806
Cagra.3356s0083 Capsella grandiflora Cagra.3356s0083 N 0.800
Carubv10005524m.g Capsella rubella Carubv10005524m.g N 0.800
Bra021029 Brassica rapa Bra021029 N 0.800
PRUPE_ppa011266mg Prunus persica PRUPE_ppa011266mg N 0.792
Pm023220 Prunus mume Pm023220 N 0.792
Gorai.004G184500 Gossypium raimondii Gorai.004G184500 N 0.787
TCM_015701 Theobroma cacao TCM_015701 N 0.787
Gorai.003G183000 Gossypium raimondii Gorai.003G183000 N 0.787
Bra035494 Brassica rapa Bra035494 N 0.787
Bra023280 Brassica rapa Bra023280 N 0.787
Bo8g028900 Brassica oleracea Bo8g028900 N 0.787
Thhalv10008750m.g Eutrema salsugineum Thhalv10008750m.g N 0.787
Lus10030968.g Linum usitatissimum Lus10030968.g N 0.778
GRMZM2G091044 Zea mays GRMZM2G091044 N 0.778
Lus10040082.g Linum usitatissimum Lus10040082.g N 0.778
Pavir.Aa01152 Panicum virgatum Pavir.Aa01152 N 0.778
Pavir.Ab01769 Panicum virgatum Pavir.Ab01769 N 0.778
Sb04g031230 Sorghum bicolor Sb04g031230 N 0.778
Ciclev10012712m.g Citrus clementina Ciclev10012712m.g N 0.773
Gorai.007G032400 Gossypium raimondii Gorai.007G032400 N 0.773
Gorai.006G217100 Gossypium raimondii Gorai.006G217100 N 0.773
PGSC0003DMG400017518 Solanum tuberosum PGSC0003DMG400017518 N 0.773
orange1.1g027730m.g Citrus sinensis orange1.1g027730m.g N 0.773
Bo5g049240 Brassica oleracea Bo5g049240 N 0.773
mgf006925m Mimulus guttatus mgf006925m N 0.773
GLYMA01G44430 Glycine max GLYMA01G44430 N 0.764
GLYMA11G01100 Glycine max GLYMA11G01100 N 0.764
Solyc08g076860.2 Solanum lycopersicum Solyc08g076860.2 N 0.760
SapurV1A.5427s0010 Salix purpurea SapurV1A.5427s0010 N 0.760
fgenesh1_pg.scaffold_102000043 Physcomitrella patens fgenesh1_pg.scaffold_102000043 N 0.760
POPTR_0003s09160 Populus trichocarpa POPTR_0003s09160 N 0.760
30054.m000824 Ricinus communis 30054.m000824 N 0.760
cassava2216.valid.m1 Manihot esculenta cassava2216.valid.m1 N 0.760
cassava37607.valid.m1 Manihot esculenta cassava37607.valid.m1 N 0.760
POPTR_0001s02390 Populus trichocarpa POPTR_0001s02390 N 0.760
MTR_5g030130 Medicago truncatula MTR_5g030130 N 0.760
GLYMA09G33770 Glycine max GLYMA09G33770 N 0.760
Lus10020337.g Linum usitatissimum Lus10020337.g N 0.760
Lus10004577.g Linum usitatissimum Lus10004577.g N 0.760
MLOC_63157 Hordeum vulgare MLOC_63157 N 0.760
SapurV1A.0151s0140 Salix purpurea SapurV1A.0151s0140 N 0.760
GLYMA01G11390 Glycine max GLYMA01G11390 N 0.750
Ciclev10032089m.g Citrus clementina Ciclev10032089m.g N 0.750
orange1.1g026096m.g Citrus sinensis orange1.1g026096m.g N 0.750
Lus10000482.g Linum usitatissimum Lus10000482.g N 0.750
VIT_02s0012g01400 Vitis vinifera VIT_02s0012g01400 N 0.747
MDP0000570901 Malus domestica MDP0000570901 N 0.747
Traes_6DL_CF3557CFC Triticum aestivum Traes_6DL_CF3557CFC N 0.747
Traes_2AL_74EFA5757 Triticum aestivum Traes_2AL_74EFA5757 N 0.747
Pavir.Gb00818 Panicum virgatum Pavir.Gb00818 N 0.747
Traes_2BL_69847FCA6 Triticum aestivum Traes_2BL_69847FCA6 N 0.747
Pavir.Ga00766 Panicum virgatum Pavir.Ga00766 N 0.747
TRIUR3_25489 Triticum urartu TRIUR3_25489 N 0.747
Ca_11505 Cicer arietinum Ca_11505 N 0.747
TRIUR3_30366 Triticum urartu TRIUR3_30366 N 0.747
MDP0000553473 Malus domestica MDP0000553473 N 0.747
gene02186-v1.0-hybrid Fragaria vesca gene02186-v1.0-hybrid N 0.747
SapurV1A.0555s0010 Salix purpurea SapurV1A.0555s0010 N 0.747
PK20928.1 Cannabis sativa PK20928.1 N 0.747
Eucgr.E00276 Eucalyptus grandis Eucgr.E00276 N 0.747
Eucgr.D02206 Eucalyptus grandis Eucgr.D02206 N 0.747
estExt_gwp_gw1.C_1330066 Physcomitrella patens estExt_gwp_gw1.C_1330066 N 0.747
e_gw1.6.367.1 Physcomitrella patens e_gw1.6.367.1 N 0.747
SapurV1A.1507s0030 Salix purpurea SapurV1A.1507s0030 N 0.747
Cla016461 Citrullus lanatus Cla016461 N 0.747
Cucsa.313040 Cucumis sativus Cucsa.313040 N 0.747
Cucsa.321900 Cucumis sativus Cucsa.321900 N 0.747
e_gw1.1.253.1 Physcomitrella patens e_gw1.1.253.1 N 0.747
Cla008966 Citrullus lanatus Cla008966 N 0.747
Solyc06g061240.2 Solanum lycopersicum Solyc06g061240.2 N 0.747
OBART02G28660 Oryza barthii OBART02G28660 N 0.747
OBART04G23520 Oryza barthii OBART04G23520 N 0.747
OB04G30420 Oryza brachyantha OB04G30420 N 0.747
MTR_4g078170 Medicago truncatula MTR_4g078170 N 0.747
MLOC_69202 Hordeum vulgare MLOC_69202 N 0.747
OGLUM02G29250 Oryza glumaepatula OGLUM02G29250 N 0.747
OGLUM04G23440 Oryza glumaepatula OGLUM04G23440 N 0.747
OPUNC02G26310 Oryza punctata OPUNC02G26310 N 0.747
ONIVA04G22750 Oryza nivara ONIVA04G22750 N 0.747
ONIVA02G31400 Oryza nivara ONIVA02G31400 N 0.747
OLONG_023395 Oryza longistaminata OLONG_023395 N 0.747
LPERR04G19240 Leersia perrieri LPERR04G19240 N 0.747
LPERR02G23300 Leersia perrieri LPERR02G23300 N 0.747
BRADI3G52170 Brachypodium distachyon BRADI3G52170 N 0.747
F775_28196 Aegilops tauschii F775_28196 N 0.747
Bo2g131400 Brassica oleracea Bo2g131400 N 0.747
BGIOSGA014451 Oryza indica BGIOSGA014451 N 0.747
BGIOSGA005806 Oryza indica BGIOSGA005806 N 0.747
GLYMA01G02180 Glycine max GLYMA01G02180 N 0.747
GLYMA12G01890 Glycine max GLYMA12G01890 N 0.747
GSMUA_Achr5G18120_001 Musa acuminata GSMUA_Achr5G18120_001 N 0.747
GSMUA_Achr5G03420_001 Musa acuminata GSMUA_Achr5G03420_001 N 0.747
GSMUA_Achr4G27280_001 Musa acuminata GSMUA_Achr4G27280_001 N 0.747
GRMZM2G131280 Zea mays GRMZM2G131280 N 0.747
OPUNC04G21040 Oryza punctata OPUNC04G21040 N 0.747
OB02G35810 Oryza brachyantha OB02G35810 N 0.747
Sb06g027000 Sorghum bicolor Sb06g027000 N 0.747
Si010911m.g Setaria italica Si010911m.g N 0.747
ORUFI04G25190 Oryza rufipogon ORUFI04G25190 N 0.747
OS04G0591100 Oryza sativa OS04G0591100 N 0.747
ORGLA02G0246600 Oryza glaberrima ORGLA02G0246600 N 0.747
PGSC0003DMG400007670 Solanum tuberosum PGSC0003DMG400007670 N 0.747
Si017318m.g Setaria italica Si017318m.g N 0.747
OS02G0692700 Oryza sativa OS02G0692700 N 0.747
ORUFI02G30220 Oryza rufipogon ORUFI02G30220 N 0.747
ORGLA04G0200500 Oryza glaberrima ORGLA04G0200500 N 0.747
AT5G46710 Arabidopsis thaliana AT5G46710 N 0.740
evm.TU.supercontig_43.104 Carica papaya evm.TU.supercontig_43.104 N 0.736
PGSC0003DMG400009931 Solanum tuberosum PGSC0003DMG400009931 N 0.736
GSMUA_Achr11G17810_001 Musa acuminata GSMUA_Achr11G17810_001 N 0.733
PGSC0003DMG400017849 Solanum tuberosum PGSC0003DMG400017849 N 0.733
LjSGA_028172.2 Lotus japonicus LjSGA_028172.2 N 0.733
GRMZM2G086403 Zea mays GRMZM2G086403 N 0.733
GSMUA_Achr2G18160_001 Musa acuminata GSMUA_Achr2G18160_001 N 0.733
GSMUA_Achr4G19110_001 Musa acuminata GSMUA_Achr4G19110_001 N 0.733
GLYMA11G11640 Glycine max GLYMA11G11640 N 0.733
chr1.CM0591.460.nd Lotus japonicus chr1.CM0591.460.nd N 0.733
scaffold_800157.1 Arabidopsis lyrata scaffold_800157.1 N 0.733
TCM_025548 Theobroma cacao TCM_025548 N 0.733
chr3.CM0127.220.nc Lotus japonicus chr3.CM0127.220.nc N 0.733
Ca_11235 Cicer arietinum Ca_11235 N 0.733
GLYMA08G36641 Glycine max GLYMA08G36641 N 0.733
PRUPE_ppa010445mg Prunus persica PRUPE_ppa010445mg N 0.733
GRMZM2G004548 Zea mays GRMZM2G004548 N 0.733
GSMUA_Achr5G13970_001 Musa acuminata GSMUA_Achr5G13970_001 N 0.733
MTR_5g007230 Medicago truncatula MTR_5g007230 N 0.733
Ca_12361 Cicer arietinum Ca_12361 N 0.733
MTR_8g066820 Medicago truncatula MTR_8g066820 N 0.733
GSMUA_Achr8G14740_001 Musa acuminata GSMUA_Achr8G14740_001 N 0.733
Aquca_005_00468 Aquilegia coerulea Aquca_005_00468 N 0.733
Bostr.28243s0064 Boechera stricta Bostr.28243s0064 N 0.733
evm.TU.supercontig_71.62 Carica papaya evm.TU.supercontig_71.62 N 0.733
Pm022874 Prunus mume Pm022874 N 0.733
Ca_11837 Cicer arietinum Ca_11837 N 0.733
30073.m002298 Ricinus communis 30073.m002298 N 0.720
SapurV1A.1141s0070 Salix purpurea SapurV1A.1141s0070 N 0.720
Bra022055 Brassica rapa Bra022055 N 0.720
AMTR_s00008p00208550 Amborella trichopoda AMTR_s00008p00208550 N 0.720
mgf002787m Mimulus guttatus mgf002787m N 0.720
cassava22380.valid.m1 Manihot esculenta cassava22380.valid.m1 N 0.720
cassava13685.valid.m1 Manihot esculenta cassava13685.valid.m1 N 0.720
Gorai.003G056500 Gossypium raimondii Gorai.003G056500 N 0.720
SapurV1A.0182s0280 Salix purpurea SapurV1A.0182s0280 N 0.720
POPTR_0019s07790 Populus trichocarpa POPTR_0019s07790 N 0.720
POPTR_0013s07610 Populus trichocarpa POPTR_0013s07610 N 0.720
VIT_16s0039g01560 Vitis vinifera VIT_16s0039g01560 N 0.720
Solyc08g005100.2 Solanum lycopersicum Solyc08g005100.2 N 0.720
Gorai.013G184000 Gossypium raimondii Gorai.013G184000 N 0.720
Lus10000952.g Linum usitatissimum Lus10000952.g N 0.708
mgf023930m Mimulus guttatus mgf023930m N 0.708
Lus10002700.g Linum usitatissimum Lus10002700.g N 0.708
mgf010773m Mimulus guttatus mgf010773m N 0.707
Bo2g131370 Brassica oleracea Bo2g131370 N 0.707
Carubv10027053m.g Capsella rubella Carubv10027053m.g N 0.707
AMTR_s00002p00211460 Amborella trichopoda AMTR_s00002p00211460 N 0.707
OB10G26540 Oryza brachyantha OB10G26540 N 0.707
PK01309.1 Cannabis sativa PK01309.1 N 0.707
mgf004069m Mimulus guttatus mgf004069m N 0.707