CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_08091
(
Verticillium albo atrum
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04542 (Sigma70_r2)
IPR007627
VDBG_08091
T323744_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_08091T0
Sigma 70
144
190
SETYLSKIRAEAAKRLKDLQKAEDAADEALLRFGTNISKFLKDAVSI
Links
Other
Sigma 70
family TFs
Other
Verticillium albo atrum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_08091
Verticillium alfalfae
VDBG_08091
N
1.000
VDAG_01589
Verticillium dahliae
VDAG_01589
N
0.979
CFIO01_11340
Colletotrichum fioriniae
CFIO01_11340
N
0.851
CH063_07073
Colletotrichum higginsianum
CH063_07073
N
0.851
CSUB01_01965
Colletotrichum sublineola
CSUB01_01965
N
0.851
GLRG_05389
Colletotrichum graminicola
GLRG_05389
N
0.851