CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CFIO01_11340
(
Colletotrichum fioriniae
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04542 (Sigma70_r2)
IPR007627
CFIO01_11340
T323804_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EXF76074
Sigma 70
138
184
SENYLTRLRSEAAKRLKDLQKAEDAADEALLRFGTNISNFLKEAVSI
Links
Other
Sigma 70
family TFs
Other
Colletotrichum fioriniae
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLRG_05389
Colletotrichum graminicola
GLRG_05389
N
0.979
CSUB01_01965
Colletotrichum sublineola
CSUB01_01965
N
0.979
CH063_07073
Colletotrichum higginsianum
CH063_07073
N
0.979
VDAG_01589
Verticillium dahliae
VDAG_01589
N
0.872
VDBG_08091
Verticillium alfalfae
VDBG_08091
N
0.851
VDBG_08091
Verticillium albo atrum
VDBG_08091
N
0.851