CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CH063_07073
(
Colletotrichum higginsianum
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04542 (Sigma70_r2)
IPR007627
CH063_07073
T323805_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCF35251
Sigma 70
138
184
SENYLARLRSEAAKRLKDLQKAEDAADEALLRFGTNISNFLKEAVSI
Links
Other
Sigma 70
family TFs
Other
Colletotrichum higginsianum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CSUB01_01965
Colletotrichum sublineola
CSUB01_01965
N
1.000
GLRG_05389
Colletotrichum graminicola
GLRG_05389
N
1.000
CFIO01_11340
Colletotrichum fioriniae
CFIO01_11340
N
0.979
VDAG_01589
Verticillium dahliae
VDAG_01589
N
0.872
VDBG_08091
Verticillium albo atrum
VDBG_08091
N
0.851
VDBG_08091
Verticillium alfalfae
VDBG_08091
N
0.851