CHLREDRAFT_189879 (Chlamydomonas reinhardtii)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 CHLREDRAFT_189879 T327057_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EDP09315 Sox 484 549

Links

Other Sox family TFs
Other Chlamydomonas reinhardtii TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_002_00505 Aquilegia coerulea Aquca_002_00505 I 0.470
PGSC0003DMG400001414 Solanum tuberosum PGSC0003DMG400001414 I 0.466
Solyc02g087710.2 Solanum lycopersicum Solyc02g087710.2 I 0.466
29822.m003476 Ricinus communis 29822.m003476 I 0.464
cassava42041.valid.m1 Manihot esculenta cassava42041.valid.m1 I 0.464
CHLREDRAFT_142283 Chlamydomonas reinhardtii CHLREDRAFT_142283 N 0.458
estExt_Genewise1.C_510099 Volvox carteri estExt_Genewise1.C_510099 N 0.458
PGSC0003DMG400018099 Solanum tuberosum PGSC0003DMG400018099 I 0.454
estExt_fgenesh1_pm.C_130068 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pm.C_130068 I 0.452
estExt_Genewise1.C_130158 Chlorella vulgaris estExt_Genewise1.C_130158 I 0.452
K437DRAFT_218621 Tilletiaria anomala K437DRAFT_218621 N 0.445
SJAG_03603 Schizosaccharomyces japonicus SJAG_03603 I 0.442
M407DRAFT_81488 Tulasnella calospora M407DRAFT_81488 I 0.441
OSTLU_19125 Ostreococcus lucimarinus OSTLU_19125 N 0.435
HYDPIDRAFT_138070 Hydnomerulius pinastri HYDPIDRAFT_138070 I 0.434
PAXRUDRAFT_828263 Paxillus rubicundulus PAXRUDRAFT_828263 I 0.434
Bra033055 Brassica rapa Bra033055 N 0.433
MDP0000165147 Malus domestica MDP0000165147 N 0.426
estExt_Genewise1.C_10428 Volvox carteri estExt_Genewise1.C_10428 N 0.424
CY34DRAFT_810312 Suillus luteus CY34DRAFT_810312 I 0.421
PDK_20s1437671g003 Phoenix dactylifera PDK_20s1437671g003 I 0.421