CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CY34DRAFT_417575
(
Suillus luteus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
CY34DRAFT_417575
T327283_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
INO
M02485_2.00
Arabidopsis thaliana
NHNNNYRNNN
NNNYRNNNDN
PBM
Weirauch et al.(2014)
pTH7516
0.459
0.375
CRC
M07266_2.00
Arabidopsis thaliana
TWATCATW
WATGATWA
Dap-seq
OMalley et al.(2016)
CRC_col_a
0.443
0.354
CRC
M07267_2.00
Arabidopsis thaliana
GGTTAGTGTTTTGGAGTCGAATATGACTTG
CAAGTCATATTCGACTCCAAAACACTAACC
Dap-seq
OMalley et al.(2016)
CRC_colamp_a
0.443
0.354
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIK37942
Sox
30
77
PKRAPSAYNLFVQAHMKEWKEAHPGAPIKEAMSEIAVMWREAPENPNR
Links
Other
Sox
family TFs
Other
Suillus luteus
TFs
172 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HETIRDRAFT_439796
Heterobasidion irregulare
HETIRDRAFT_439796
I
0.583
estExt_fgenesh3_kg.C_170031
Heterobasidion annosum
estExt_fgenesh3_kg.C_170031
I
0.583
SCLCIDRAFT_1214155
Scleroderma citrinum
SCLCIDRAFT_1214155
N
0.561
PAXRUDRAFT_625911
Paxillus rubicundulus
PAXRUDRAFT_625911
N
0.557
GLOTRDRAFT_107384
Gloeophyllum trabeum
GLOTRDRAFT_107384
I
0.534
PAXINDRAFT_100855
Paxillus involutus
PAXINDRAFT_100855
N
0.520
PLEOSDRAFT_1090547
Pleurotus ostreatus
PLEOSDRAFT_1090547
I
0.510
TRIVIDRAFT_16124
Trichoderma virens
TRIVIDRAFT_16124
N
0.506
PLICRDRAFT_179042
Plicaturopsis crispa
PLICRDRAFT_179042
I
0.504
Moror_16065
Moniliophthora roreri
Moror_16065
I
0.503
HYDPIDRAFT_177430
Hydnomerulius pinastri
HYDPIDRAFT_177430
N
0.482
mgf023167m
Mimulus guttatus
mgf023167m
I
0.471
Cob_07971
Colletotrichum orbiculare
Cob_07971
N
0.470
GLRG_05645
Colletotrichum graminicola
GLRG_05645
N
0.463
GALMADRAFT_215335
Galerina marginata
GALMADRAFT_215335
I
0.460
INO
Arabidopsis thaliana
AT1G23420
D
0.459
Bo5g039580
Brassica oleracea
Bo5g039580
I
0.459
Bo7g056180
Brassica oleracea
Bo7g056180
I
0.459
Bra012373
Brassica rapa
Bra012373
I
0.459
Bra024599
Brassica rapa
Bra024599
I
0.459
INO
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1002152
I
0.459
GGTG_05735
Gaeumannomyces graminis
GGTG_05735
N
0.459
Bostr.12659s0203
Boechera stricta
Bostr.12659s0203
I
0.459
SPPG_09438
Spizellomyces punctatus
SPPG_09438
I
0.453
chd3
Oryzias latipes
ENSORLG00000007107
N
0.451
ENSTNIG00000004346
Tetraodon nigroviridis
ENSTNIG00000004346
N
0.451
CGGC5_1942
Colletotrichum gloeosporioides
CGGC5_1942
N
0.450
CSUB01_02862
Colletotrichum sublineola
CSUB01_02862
N
0.450
GSMUA_Achr3G25290_001
Musa acuminata
GSMUA_Achr3G25290_001
I
0.450
GSMUA_Achr8G04340_001
Musa acuminata
GSMUA_Achr8G04340_001
I
0.450
gene04566-v1.0-hybrid
Fragaria vesca
gene04566-v1.0-hybrid
I
0.450
POPTR_0008s09740
Populus trichocarpa
POPTR_0008s09740
I
0.449
mgf007067m
Mimulus guttatus
mgf007067m
I
0.449
MDP0000171878
Malus domestica
MDP0000171878
I
0.449
AMTR_s00047p00199030
Amborella trichopoda
AMTR_s00047p00199030
I
0.445
BBA_10208
Beauveria bassiana
BBA_10208
N
0.444
ACRE_034400
Acremonium chrysogenum
ACRE_034400
N
0.443
CRC
Arabidopsis thaliana
AT1G69180
D
0.443
BGIOSGA012115
Oryza indica
BGIOSGA012115
I
0.443
Bo6g108630
Brassica oleracea
Bo6g108630
I
0.443
Bra004364
Brassica rapa
Bra004364
I
0.443
BRADI1G69900
Brachypodium distachyon
BRADI1G69900
I
0.443
CRC
Arabidopsis lyrata
fgenesh2_kg.2__1172__AT1G69180.1
I
0.443
GLYMA01G08030
Glycine max
GLYMA01G08030
I
0.443
GLYMA02G13350
Glycine max
GLYMA02G13350
I
0.443
GRMZM2G088309
Zea mays
GRMZM2G088309
I
0.443
GRMZM2G102218
Zea mays
GRMZM2G102218
I
0.443
GSMUA_Achr4G01430_001
Musa acuminata
GSMUA_Achr4G01430_001
I
0.443
GSMUA_Achr6G24550_001
Musa acuminata
GSMUA_Achr6G24550_001
I
0.443
LPERR03G07620
Leersia perrieri
LPERR03G07620
I
0.443
OB03G18700
Oryza brachyantha
OB03G18700
I
0.443
OBART03G08320
Oryza barthii
OBART03G08320
I
0.443
OGLUM03G08460
Oryza glumaepatula
OGLUM03G08460
I
0.443
OLONG_009200
Oryza longistaminata
OLONG_009200
I
0.443
OMERI03G08070
Oryza meridionalis
OMERI03G08070
I
0.443
ONIVA03G09180
Oryza nivara
ONIVA03G09180
I
0.443
OPUNC03G08080
Oryza punctata
OPUNC03G08080
I
0.443
ORGLA03G0081000
Oryza glaberrima
ORGLA03G0081000
I
0.443
ORUFI03G08400
Oryza rufipogon
ORUFI03G08400
I
0.443
OS03G0215200
Oryza sativa
OS03G0215200
I
0.443
PRUPE_ppa014900mg
Prunus persica
PRUPE_ppa014900mg
I
0.443
Sb01g042850
Sorghum bicolor
Sb01g042850
I
0.443
Si037608m.g
Setaria italica
Si037608m.g
I
0.443
TCM_011484
Theobroma cacao
TCM_011484
I
0.443
Traes_4AS_BE972A2661
Triticum aestivum
Traes_4AS_BE972A2661
I
0.443
Traes_4AS_BE972A266
Triticum aestivum
Traes_4AS_BE972A266
I
0.443
Traes_4BL_34FE2C7F2
Triticum aestivum
Traes_4BL_34FE2C7F2
I
0.443
TRIUR3_31693
Triticum urartu
TRIUR3_31693
I
0.443
CRC
Vitis vinifera
VIT_01s0011g00140
I
0.443
Ca_12379
Cicer arietinum
Ca_12379
I
0.443
Ca_18533
Cicer arietinum
Ca_18533
I
0.443
Cla010397
Citrullus lanatus
Cla010397
I
0.443
Pm030598
Prunus mume
Pm030598
I
0.443
30174.m009083
Ricinus communis
30174.m009083
I
0.443
cassava10710.m1
Manihot esculenta
cassava10710.m1
I
0.443
cassava39135.m1
Manihot esculenta
cassava39135.m1
I
0.443
Cucsa.284430
Cucumis sativus
Cucsa.284430
I
0.443
mgf001016m
Mimulus guttatus
mgf001016m
I
0.443
Bostr.10273s0455
Boechera stricta
Bostr.10273s0455
I
0.443
Cagra.0537s0004
Capsella grandiflora
Cagra.0537s0004
I
0.443
Carubv10021641m.g
Capsella rubella
Carubv10021641m.g
I
0.443
Ciclev10033770m.g
Citrus clementina
Ciclev10033770m.g
I
0.443
Eucgr.B03140
Eucalyptus grandis
Eucgr.B03140
I
0.443
evm.TU.contig_30608
Carica papaya
evm.TU.contig_30608
I
0.443
Gorai.005G146700
Gossypium raimondii
Gorai.005G146700
I
0.443
Lus10036811.g
Linum usitatissimum
Lus10036811.g
I
0.443
MDP0000124879
Malus domestica
MDP0000124879
I
0.443
MDP0000291729
Malus domestica
MDP0000291729
I
0.443
Pavir.Ia04690
Panicum virgatum
Pavir.Ia04690
I
0.443
Pavir.Ib00755
Panicum virgatum
Pavir.Ib00755
I
0.443
SapurV1A.0176s0460
Salix purpurea
SapurV1A.0176s0460
I
0.443
Thhalv10019126m.g
Eutrema salsugineum
Thhalv10019126m.g
I
0.443
PK13838.1
Cannabis sativa
PK13838.1
I
0.443
PDK_20s1325902g001
Phoenix dactylifera
PDK_20s1325902g001
I
0.443
SPPG_01639
Spizellomyces punctatus
SPPG_01639
I
0.439
GSMUA_Achr5G08930_001
Musa acuminata
GSMUA_Achr5G08930_001
I
0.439
PGSC0003DMG400028360
Solanum tuberosum
PGSC0003DMG400028360
I
0.439
Solyc05g012050.2
Solanum lycopersicum
Solyc05g012050.2
I
0.439
GSMUA_Achr1G24490_001
Musa acuminata
GSMUA_Achr1G24490_001
I
0.437
GSMUA_Achr1G27150_001
Musa acuminata
GSMUA_Achr1G27150_001
I
0.437
MYCTH_2308522
Myceliophthora thermophila
MYCTH_2308522
I
0.437
POPTR_0010s16410
Populus trichocarpa
POPTR_0010s16410
I
0.437
SERLA73DRAFT_131740
Serpula lacrymans
SERLA73DRAFT_131740
I
0.437
THITE_22048
Thielavia terrestris
THITE_22048
I
0.437
SapurV1A.0072s0330
Salix purpurea
SapurV1A.0072s0330
I
0.437
fgenesh1_pg.C_scaffold_10000074
Cryphonectria parasitica
fgenesh1_pg.C_scaffold_10000074
I
0.437
CH063_08320
Colletotrichum higginsianum
CH063_08320
N
0.435
Solyc05g005240.1
Solanum lycopersicum
Solyc05g005240.1
I
0.434
Lus10013028.g
Linum usitatissimum
Lus10013028.g
I
0.434
Lus10029135.g
Linum usitatissimum
Lus10029135.g
I
0.434
MDP0000126221
Malus domestica
MDP0000126221
I
0.434
M413DRAFT_168289
Hebeloma cylindrosporum
M413DRAFT_168289
N
0.433
GSMUA_Achr1G04480_001
Musa acuminata
GSMUA_Achr1G04480_001
I
0.432
Eucgr.B03310
Eucalyptus grandis
Eucgr.B03310
I
0.430
PTSG_02585
Salpingoeca rosetta
PTSG_02585
N
0.428
AMTR_s00096p00054100
Amborella trichopoda
AMTR_s00096p00054100
I
0.428
GSMUA_Achr3G15060_001
Musa acuminata
GSMUA_Achr3G15060_001
I
0.428
GSMUA_Achr5G23610_001
Musa acuminata
GSMUA_Achr5G23610_001
I
0.428
GSMUA_Achr8G26600_001
Musa acuminata
GSMUA_Achr8G26600_001
I
0.428
POPTR_0010s05220
Populus trichocarpa
POPTR_0010s05220
I
0.428
PRUPE_ppa023883mg
Prunus persica
PRUPE_ppa023883mg
I
0.428
INO
Vitis vinifera
VIT_01s0127g00330
I
0.428
Cla000824
Citrullus lanatus
Cla000824
I
0.428
Pm006709
Prunus mume
Pm006709
I
0.428
cassava26804.m1
Manihot esculenta
cassava26804.m1
I
0.428
cassava41595.m1
Manihot esculenta
cassava41595.m1
I
0.428
Cucsa.394330
Cucumis sativus
Cucsa.394330
I
0.428
Cagra.0605s0067
Capsella grandiflora
Cagra.0605s0067
I
0.428
Carubv10012024m.g
Capsella rubella
Carubv10012024m.g
I
0.428
MDP0000263713
Malus domestica
MDP0000263713
I
0.428
orange1.1g037247m.g
Citrus sinensis
orange1.1g037247m.g
I
0.428
SapurV1A.0269s0230
Salix purpurea
SapurV1A.0269s0230
I
0.428
PDK_20s1781371g001
Phoenix dactylifera
PDK_20s1781371g001
I
0.428
AMAG_02504
Allomyces macrogynus
AMAG_02504
I
0.427
GLYMA04G10125
Glycine max
GLYMA04G10125
I
0.427
GLYMA06G10110
Glycine max
GLYMA06G10110
I
0.427
GLYMA08G39290
Glycine max
GLYMA08G39290
I
0.427
GLYMA18G19720
Glycine max
GLYMA18G19720
I
0.427
K443DRAFT_674317
Laccaria amethystina
K443DRAFT_674317
N
0.427
LACBIDRAFT_297819
Laccaria bicolor
LACBIDRAFT_297819
N
0.427
LPERR07G16630
Leersia perrieri
LPERR07G16630
I
0.427
MTR_5g034030
Medicago truncatula
MTR_5g034030
I
0.427
Ca_21472
Cicer arietinum
Ca_21472
I
0.427
chr2.CM0008.270.nc
Lotus japonicus
chr2.CM0008.270.nc
I
0.427
EMIHUDRAFT_114782
Emiliania huxleyi
EMIHUDRAFT_114782
I
0.426
EMIHUDRAFT_98817
Emiliania huxleyi
EMIHUDRAFT_98817
I
0.426
M407DRAFT_228275
Tulasnella calospora
M407DRAFT_228275
N
0.424
OFLC_0001223401
Onchocerca flexuosa
OFLC_0001223401
N
0.422
BGIOSGA025976
Oryza indica
BGIOSGA025976
I
0.421
GSMUA_Achr4G31310_001
Musa acuminata
GSMUA_Achr4G31310_001
I
0.421
GSMUA_Achr6G31080_001
Musa acuminata
GSMUA_Achr6G31080_001
I
0.421
GSMUA_Achr7G07830_001
Musa acuminata
GSMUA_Achr7G07830_001
I
0.421
GSMUA_Achr8G04750_001
Musa acuminata
GSMUA_Achr8G04750_001
I
0.421
OB07G25220
Oryza brachyantha
OB07G25220
I
0.421
OLONG_001420
Oryza longistaminata
OLONG_001420
I
0.421
OMERI07G16070
Oryza meridionalis
OMERI07G16070
I
0.421
ORGLA07G0250200
Oryza glaberrima
ORGLA07G0250200
I
0.421
POPTR_0008s19330
Populus trichocarpa
POPTR_0008s19330
I
0.421
VIT_08s0032g01110
Vitis vinifera
VIT_08s0032g01110
I
0.421
Cla010239
Citrullus lanatus
Cla010239
I
0.421
cassava27370.m1
Manihot esculenta
cassava27370.m1
I
0.421
evm.TU.supercontig_69.72
Carica papaya
evm.TU.supercontig_69.72
I
0.421
SapurV1A.0069s0070
Salix purpurea
SapurV1A.0069s0070
I
0.421
Thhalv10008669m.g
Eutrema salsugineum
Thhalv10008669m.g
I
0.421
CC1G_09089
Coprinopsis cinerea
CC1G_09089
N
0.420
GSMUA_Achr2G12850_001
Musa acuminata
GSMUA_Achr2G12850_001
I
0.418
BGHDH14_bgh01382
Blumeria graminis
BGHDH14_bgh01382
N
0.417
CFIO01_04039
Colletotrichum fioriniae
CFIO01_04039
N
0.416
PV09_07652
Verruconis gallopava
PV09_07652
I
0.416
Cucsa.320600
Cucumis sativus
Cucsa.320600
I
0.416
GRMZM2G046829
Zea mays
GRMZM2G046829
I
0.415
PODANS_5_8400
Podospora anserina
PODANS_5_8400
N
0.415