CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRIVIDRAFT_16124
(
Trichoderma virens
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
TRIVIDRAFT_16124
T333068_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EHK23218
Sox
202
244
PTSQLSEYQLFVKEQMKVVKSEHPNSPQKEIMRIIAERWAKVK
Links
Other
Sox
family TFs
Other
Trichoderma virens
TFs
115 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MYCTH_2308522
Myceliophthora thermophila
MYCTH_2308522
I
0.605
Cob_07971
Colletotrichum orbiculare
Cob_07971
N
0.588
THITE_22048
Thielavia terrestris
THITE_22048
I
0.578
GLRG_05645
Colletotrichum graminicola
GLRG_05645
N
0.567
TRIATDRAFT_37227
Trichoderma atroviride
TRIATDRAFT_37227
N
0.556
CGGC5_1942
Colletotrichum gloeosporioides
CGGC5_1942
N
0.554
CSUB01_02862
Colletotrichum sublineola
CSUB01_02862
N
0.554
BBA_10208
Beauveria bassiana
BBA_10208
N
0.552
ACRE_034400
Acremonium chrysogenum
ACRE_034400
N
0.545
fgenesh1_pg.C_scaffold_10000074
Cryphonectria parasitica
fgenesh1_pg.C_scaffold_10000074
I
0.541
CH063_08320
Colletotrichum higginsianum
CH063_08320
N
0.539
VHEMI02919
Torrubiella hemipterigena
VHEMI02919
N
0.536
S40285_07156
Stachybotrys chlorohalonata
S40285_07156
N
0.531
S40288_05696
Stachybotrys chartarum
S40288_05696
N
0.531
CFIO01_04039
Colletotrichum fioriniae
CFIO01_04039
N
0.520
PODANS_5_8400
Podospora anserina
PODANS_5_8400
N
0.520
MBM_07425
Marssonina brunnea
MBM_07425
N
0.511
OCS_03846
Ophiocordyceps sinensis
OCS_03846
N
0.511
CY34DRAFT_417575
Suillus luteus
CY34DRAFT_417575
I
0.506
MGG_00866
Magnaporthe oryzae
MGG_00866
N
0.501
GGTG_05735
Gaeumannomyces graminis
GGTG_05735
N
0.490
MAC_01687
Metarhizium acridum
MAC_01687
I
0.482
MAJ_02341
Metarhizium majus
MAJ_02341
N
0.469
X797_000915
Metarhizium robertsii
X797_000915
N
0.469
EV44_g2732
Erysiphe necator
EV44_g2732
N
0.463
MAM_00136
Metarhizium album
MAM_00136
N
0.463
MANI_015331
Metarhizium anisopliae
MANI_015331
N
0.462
MGU_00155
Metarhizium guizhouense
MGU_00155
N
0.462
CMQ_1415
Grosmannia clavigera
CMQ_1415
N
0.461
OIDMADRAFT_54116
Oidiodendron maius
OIDMADRAFT_54116
N
0.458
MAPG_04417
Magnaporthe poae
MAPG_04417
N
0.453
SERLA73DRAFT_131740
Serpula lacrymans
SERLA73DRAFT_131740
I
0.449
M407DRAFT_16670
Tulasnella calospora
M407DRAFT_16670
N
0.448
UV8b_7580
Ustilaginoidea virens
UV8b_7580
N
0.447
Bcin02g06030
Botrytis cinerea
Bcin02g06030
N
0.440
PV09_07652
Verruconis gallopava
PV09_07652
I
0.439
CPUR_08694
Claviceps purpurea
CPUR_08694
I
0.437
GSTUM_00007488001
Tuber melanosporum
GSTUM_00007488001
N
0.435
SS1G_11040
Sclerotinia sclerotiorum
SS1G_11040
N
0.435
ACEP22065
Atta cephalotes
ACEP22065
N
0.434
BGIBMGA002931
Bombyx mori
BGIBMGA002931
N
0.434
BOTBODRAFT_40635
Botryobasidium botryosum
BOTBODRAFT_40635
N
0.434
KGM_21779
Danaus plexippus
KGM_21779
N
0.434
MCINX004608
Melitaea cinxia
MCINX004608
N
0.434
SINV11745
Solenopsis invicta
SINV11745
N
0.434
YQE_12532
Dendroctonus ponderosae
YQE_12532
N
0.434
LDEC009474
Leptinotarsa decemlineata
LDEC009474
N
0.434
NCU06874
Neurospora crassa
NCU06874
N
0.433
Moror_16065
Moniliophthora roreri
Moror_16065
I
0.432
AMTR_s00047p00199030
Amborella trichopoda
AMTR_s00047p00199030
I
0.427
BGHDH14_bgh01382
Blumeria graminis
BGHDH14_bgh01382
N
0.427
GLOTRDRAFT_107384
Gloeophyllum trabeum
GLOTRDRAFT_107384
I
0.427
POPTR_0008s09740
Populus trichocarpa
POPTR_0008s09740
I
0.427
mgf007067m
Mimulus guttatus
mgf007067m
I
0.427
fgenesh2_pg.C_Chr_03000283
Micromonas sp RCC299
fgenesh2_pg.C_Chr_03000283
N
0.427
PGSC0003DMG400028360
Solanum tuberosum
PGSC0003DMG400028360
I
0.426
Solyc05g012050.2
Solanum lycopersicum
Solyc05g012050.2
I
0.426
fgeneshHS_pg.scaffold_50000080
Naegleria gruberi
fgeneshHS_pg.scaffold_50000080
N
0.425
PTSG_02585
Salpingoeca rosetta
PTSG_02585
N
0.424
BGIOSGA012115
Oryza indica
BGIOSGA012115
I
0.421
BRADI1G69900
Brachypodium distachyon
BRADI1G69900
I
0.421
GLYMA01G08030
Glycine max
GLYMA01G08030
I
0.421
GLYMA02G13350
Glycine max
GLYMA02G13350
I
0.421
GRMZM2G088309
Zea mays
GRMZM2G088309
I
0.421
GRMZM2G102218
Zea mays
GRMZM2G102218
I
0.421
GSMUA_Achr3G25290_001
Musa acuminata
GSMUA_Achr3G25290_001
I
0.421
GSMUA_Achr4G01430_001
Musa acuminata
GSMUA_Achr4G01430_001
I
0.421
GSMUA_Achr5G08930_001
Musa acuminata
GSMUA_Achr5G08930_001
I
0.421
GSMUA_Achr6G24550_001
Musa acuminata
GSMUA_Achr6G24550_001
I
0.421
GSMUA_Achr8G04340_001
Musa acuminata
GSMUA_Achr8G04340_001
I
0.421
LPERR03G07620
Leersia perrieri
LPERR03G07620
I
0.421
OB03G18700
Oryza brachyantha
OB03G18700
I
0.421
OBART03G08320
Oryza barthii
OBART03G08320
I
0.421
OGLUM03G08460
Oryza glumaepatula
OGLUM03G08460
I
0.421
OLONG_009200
Oryza longistaminata
OLONG_009200
I
0.421
OMERI03G08070
Oryza meridionalis
OMERI03G08070
I
0.421
ONIVA03G09180
Oryza nivara
ONIVA03G09180
I
0.421
OPUNC03G08080
Oryza punctata
OPUNC03G08080
I
0.421
ORGLA03G0081000
Oryza glaberrima
ORGLA03G0081000
I
0.421
ORUFI03G08400
Oryza rufipogon
ORUFI03G08400
I
0.421
OS03G0215200
Oryza sativa
OS03G0215200
I
0.421
POPTR_0010s16410
Populus trichocarpa
POPTR_0010s16410
I
0.421
PRUPE_ppa014900mg
Prunus persica
PRUPE_ppa014900mg
I
0.421
Sb01g042850
Sorghum bicolor
Sb01g042850
I
0.421
Si037608m.g
Setaria italica
Si037608m.g
I
0.421
TCM_011484
Theobroma cacao
TCM_011484
I
0.421
Traes_4AS_BE972A2661
Triticum aestivum
Traes_4AS_BE972A2661
I
0.421
Traes_4AS_BE972A266
Triticum aestivum
Traes_4AS_BE972A266
I
0.421
Traes_4BL_34FE2C7F2
Triticum aestivum
Traes_4BL_34FE2C7F2
I
0.421
TRIUR3_31693
Triticum urartu
TRIUR3_31693
I
0.421
CRC
Vitis vinifera
VIT_01s0011g00140
I
0.421
Ca_12379
Cicer arietinum
Ca_12379
I
0.421
Ca_18533
Cicer arietinum
Ca_18533
I
0.421
Cla010397
Citrullus lanatus
Cla010397
I
0.421
Pm030598
Prunus mume
Pm030598
I
0.421
30174.m009083
Ricinus communis
30174.m009083
I
0.421
cassava10710.m1
Manihot esculenta
cassava10710.m1
I
0.421
cassava39135.m1
Manihot esculenta
cassava39135.m1
I
0.421
Cucsa.284430
Cucumis sativus
Cucsa.284430
I
0.421
Ciclev10033770m.g
Citrus clementina
Ciclev10033770m.g
I
0.421
Eucgr.B03140
Eucalyptus grandis
Eucgr.B03140
I
0.421
evm.TU.contig_30608
Carica papaya
evm.TU.contig_30608
I
0.421
gene04566-v1.0-hybrid
Fragaria vesca
gene04566-v1.0-hybrid
I
0.421
Gorai.005G146700
Gossypium raimondii
Gorai.005G146700
I
0.421
Lus10036811.g
Linum usitatissimum
Lus10036811.g
I
0.421
Pavir.Ia04690
Panicum virgatum
Pavir.Ia04690
I
0.421
Pavir.Ib00755
Panicum virgatum
Pavir.Ib00755
I
0.421
SapurV1A.0072s0330
Salix purpurea
SapurV1A.0072s0330
I
0.421
SapurV1A.0176s0460
Salix purpurea
SapurV1A.0176s0460
I
0.421
PK13838.1
Cannabis sativa
PK13838.1
I
0.421
PDK_20s1325902g001
Phoenix dactylifera
PDK_20s1325902g001
I
0.421
mgf001016m
Mimulus guttatus
mgf001016m
I
0.419
GUITHDRAFT_116466
Guillardia theta
GUITHDRAFT_116466
N
0.418
GUITHDRAFT_163519
Guillardia theta
GUITHDRAFT_163519
I
0.416
SBOR_2840
Sclerotinia borealis
SBOR_2840
N
0.415