CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GG15368
(
Drosophila erecta
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
FBgn0107620
T329593_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TFAM
M11336_2.00
Drosophila melanogaster
KNMTTATCVNH
DNBGATAAKNM
Transfac
Matys et al.(2006)
I$MTTFA_01
0.658
0.861
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0133914
Sox
51
119
PRKPLTPYFRFMREQRPKLKAVNPQISTIEVVRTLSKNWSDADAHLKERLQAEFKRDQQIYLEQRTKYD
FBpp0133914
Sox
156
223
PKKPASAFLRFIASERTNTPQGAEQTYREWHQKTTAKWSRLSDSEKEVYMQESRKEMELYRKAISVWE
Links
Other
Sox
family TFs
Other
Drosophila erecta
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GE25063
Drosophila yakuba
FBgn0242151
I
0.716
GF18333
Drosophila ananassae
FBgn0095351
I
0.688
GD20056
Drosophila simulans
FBgn0191537
I
0.675
GH14163
Drosophila grimshawi
FBgn0121639
I
0.669
TFAM
Drosophila melanogaster
FBgn0038805
D
0.658
GA18041
Drosophila pseudoobscura
FBgn0078049
I
0.658
GL13929
Drosophila persimilis
FBgn0151534
I
0.658
GJ24186
Drosophila virilis
FBgn0211269
I
0.649
GM23183
Drosophila sechellia
FBgn0178050
I
0.644
GI10534
Drosophila mojavensis
FBgn0133298
I
0.639
GK22718
Drosophila willistoni
FBgn0224695
I
0.581
LCUP004798
Lucilia cuprina
LCUP004798
I
0.577
MDOA011890
Musca domestica
MDOA011890
I
0.533