CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GI10534
(
Drosophila mojavensis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
FBgn0133298
T329636_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TFAM
M11336_2.00
Drosophila melanogaster
KNMTTATCVNH
DNBGATAAKNM
Transfac
Matys et al.(2006)
I$MTTFA_01
0.597
0.708
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0159751
Sox
50
118
PKKPLTPYFRFMREMRPKMLAKNPSISTIEVVRQLSKSWGEADPKLKERLQSEYKRDQELYLEQRTKYD
FBpp0159751
Sox
155
222
PKKPASAFLRFIAIERTNTPQTENQTYREWHQKATAKWTRLSDEEKAVYLNESRKELDQYKKNISIWE
Links
Other
Sox
family TFs
Other
Drosophila mojavensis
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GG15368
Drosophila erecta
FBgn0107620
I
0.639
GJ24186
Drosophila virilis
FBgn0211269
I
0.637
GH14163
Drosophila grimshawi
FBgn0121639
I
0.618
GF18333
Drosophila ananassae
FBgn0095351
I
0.617
GE25063
Drosophila yakuba
FBgn0242151
I
0.617
GA18041
Drosophila pseudoobscura
FBgn0078049
I
0.616
GL13929
Drosophila persimilis
FBgn0151534
I
0.616
GD20056
Drosophila simulans
FBgn0191537
I
0.614
TFAM
Drosophila melanogaster
FBgn0038805
D
0.597
GM23183
Drosophila sechellia
FBgn0178050
I
0.597
GK22718
Drosophila willistoni
FBgn0224695
I
0.575
LCUP004798
Lucilia cuprina
LCUP004798
I
0.562
MDOA011890
Musca domestica
MDOA011890
I
0.530