LCUP004798 (Lucilia cuprina)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 LCUP004798 T334863_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TFAM
M11336_2.00 		Drosophila melanogaster
KNMTTATCVNH
DNBGATAAKNM		 Transfac
Matys et al.(2006)
I$MTTFA_01 		0.538 0.635
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LCUP004798-PA Sox 95 163
LCUP004798-PA Sox 200 267

Links

Other Sox family TFs
Other Lucilia cuprina TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GG15368 Drosophila erecta FBgn0107620 I 0.577
GA18041 Drosophila pseudoobscura FBgn0078049 I 0.574
GH14163 Drosophila grimshawi FBgn0121639 I 0.574
GL13929 Drosophila persimilis FBgn0151534 I 0.574
MDOA011890 Musca domestica MDOA011890 I 0.572
GE25063 Drosophila yakuba FBgn0242151 I 0.567
GJ24186 Drosophila virilis FBgn0211269 I 0.566
GF18333 Drosophila ananassae FBgn0095351 I 0.565
GI10534 Drosophila mojavensis FBgn0133298 I 0.562
GD20056 Drosophila simulans FBgn0191537 I 0.555
TFAM Drosophila melanogaster FBgn0038805 D 0.538
GM23183 Drosophila sechellia FBgn0178050 I 0.538
GK22718 Drosophila willistoni FBgn0224695 I 0.512