CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OS02G0258200
(
Oryza sativa
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
OS02G0258200
T331703_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OS02T0258200-01
Sox
47
113
PKQPMSAYFVYTQQRRAALVAEKKNVPEIGRITGEEWKAMSEAEKAPFEAAARKQREEYQVEMAAYR
OS02T0258200-01
Sox
176
244
PKKPASSFLLFSKEARRQLAEERPGVASSTLTALVSVKWKELGEAEKQAWNGKAAEAMAAYKRDMEEYT
Links
Other
Sox
family TFs
Other
Oryza sativa
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA006746
Oryza indica
BGIOSGA006746
I
0.463
OBART02G11160
Oryza barthii
OBART02G11160
I
0.463
OGLUM02G11100
Oryza glumaepatula
OGLUM02G11100
I
0.463
ONIVA02G12490
Oryza nivara
ONIVA02G12490
I
0.463
ORUFI02G11130
Oryza rufipogon
ORUFI02G11130
I
0.463
OPUNC02G09900
Oryza punctata
OPUNC02G09900
I
0.456
OLONG_021730
Oryza longistaminata
OLONG_021730
N
0.450
OMERI02G11890
Oryza meridionalis
OMERI02G11890
N
0.430