CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OSTLU_28032
(
Ostreococcus lucimarinus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
OSTLU_28032
T331725_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ABP00143
Sox
97
165
PKGPKGAYMCFVSARRSQIKDANPDMTFPDIARELGVEWKTMSEASRHRYEQMAELDKDRYTREMLSYV
Links
Other
Sox
family TFs
Other
Ostreococcus lucimarinus
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh2_pg.C_Chr_100288
Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_100288
N
0.587
EuGene.0000160151
Micromonas pusilla
EuGene.0000160151
N
0.535
EuGene.1600010185
Ostreococcus RCC809
EuGene.1600010185
N
0.522
gw1.17.00.287.1
Ostreococcus tauri
gw1.17.00.287.1
N
0.471
VHEMI10573
Torrubiella hemipterigena
VHEMI10573
I
0.431
TRIATDRAFT_321166
Trichoderma atroviride
TRIATDRAFT_321166
I
0.428