CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw1.17.00.287.1
(
Ostreococcus tauri
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
gw1.17.00.287.1
T335250_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.17.00.287.1
Sox
10
73
PKGPKGPYMMFCAERRPKIKKEKPNLSFQDIARQLGTEWRTMSDSVRAQYEHMAENDKTRYAKE
Links
Other
Sox
family TFs
Other
Ostreococcus tauri
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EuGene.1600010185
Ostreococcus RCC809
EuGene.1600010185
N
0.579
OSTLU_28032
Ostreococcus lucimarinus
OSTLU_28032
N
0.471
estExt_fgenesh2_pg.C_Chr_100288
Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_100288
N
0.445
HelroG72245
Helobdella robusta
HelroG72245
N
0.433
EuGene.0000160151
Micromonas pusilla
EuGene.0000160151
N
0.430
gw1.30.62.1
Fragilariopsis cylindrus
gw1.30.62.1
N
0.423