CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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EuGene.0000160151
(
Micromonas pusilla
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
EuGene.0000160151
T334087_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EuGene.0000160151
Sox
87
155
PKGPKGAYMCFVQIARPKINASQPGLKFAEIAKQLGEQWKSMDAPTRAKYDKLAEDDKLRYARDIAAYV
Links
Other
Sox
family TFs
Other
Micromonas pusilla
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh2_pg.C_Chr_100288
Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_100288
N
0.683
OSTLU_28032
Ostreococcus lucimarinus
OSTLU_28032
N
0.535
EuGene.1600010185
Ostreococcus RCC809
EuGene.1600010185
N
0.495
gw1.17.00.287.1
Ostreococcus tauri
gw1.17.00.287.1
N
0.430