estExt_Genewise1Plus.C_51175 (Fragilariopsis cylindrus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 estExt_Genewise1Plus.C_51175 T334072_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_51175 Sox 120 189

Links

Other Sox family TFs
Other Fragilariopsis cylindrus TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g044275m.g Citrus sinensis orange1.1g044275m.g I 0.480
estExt_fgenesh1_pg.C_2230007 Physcomitrella patens estExt_fgenesh1_pg.C_2230007 I 0.462
EmuJ_000894800 Echinococcus multilocularis EmuJ_000894800 N 0.445
ECANG7_00770 Echinococcus canadensis ECANG7_00770 N 0.445
ETH_00031100 Eimeria tenella ETH_00031100 I 0.428
AMTR_s00046p00227790 Amborella trichopoda AMTR_s00046p00227790 N 0.420
Gorai.008G147700 Gossypium raimondii Gorai.008G147700 I 0.420
Cucsa.300030 Cucumis sativus Cucsa.300030 I 0.419
Cla009222 Citrullus lanatus Cla009222 I 0.419
TTAC_0000692101 Hydatigera taeniaeformis TTAC_0000692101 N 0.415
TASK_0000475801 Taenia asiatica TASK_0000475801 N 0.415
TsM_000111500 Taenia solium TsM_000111500 N 0.415