Ciclev10011294m.g (Citrus clementina)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Ciclev10011294m.g T334435_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10011294m Sox 35 104

Links

Other Sox family TFs
Other Citrus clementina TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g043878m.g Citrus sinensis orange1.1g043878m.g N 0.741
VIT_14s0006g01840 Vitis vinifera VIT_14s0006g01840 N 0.687
TCM_045462 Theobroma cacao TCM_045462 N 0.668
PK10571.1 Cannabis sativa PK10571.1 N 0.666
Gorai.010G218300 Gossypium raimondii Gorai.010G218300 N 0.658
PRUPE_ppa003531mg Prunus persica PRUPE_ppa003531mg N 0.639
Pm014490 Prunus mume Pm014490 N 0.639
28748.m000216 Ricinus communis 28748.m000216 N 0.638
evm.TU.supercontig_116.14 Carica papaya evm.TU.supercontig_116.14 N 0.638
SapurV1A.0230s0030 Salix purpurea SapurV1A.0230s0030 N 0.638
SapurV1A.0728s0020 Salix purpurea SapurV1A.0728s0020 N 0.638
PGSC0003DMG400016690 Solanum tuberosum PGSC0003DMG400016690 N 0.629
Solyc03g043600.1 Solanum lycopersicum Solyc03g043600.1 N 0.629
MDP0000237182 Malus domestica MDP0000237182 N 0.606
POPTR_0004s09080 Populus trichocarpa POPTR_0004s09080 N 0.597
GLYMA10G34561 Glycine max GLYMA10G34561 N 0.550