evm.TU.supercontig_116.14 (Carica papaya)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 evm.TU.supercontig_116.14 T334490_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_116.14 Sox 22 91

Links

Other Sox family TFs
Other Carica papaya TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28748.m000216 Ricinus communis 28748.m000216 N 0.741
SapurV1A.0728s0020 Salix purpurea SapurV1A.0728s0020 N 0.714
SapurV1A.0230s0030 Salix purpurea SapurV1A.0230s0030 N 0.714
PK10571.1 Cannabis sativa PK10571.1 N 0.675
Gorai.010G218300 Gossypium raimondii Gorai.010G218300 N 0.669
VIT_14s0006g01840 Vitis vinifera VIT_14s0006g01840 N 0.664
TCM_045462 Theobroma cacao TCM_045462 N 0.651
Pm014490 Prunus mume Pm014490 N 0.649
PRUPE_ppa003531mg Prunus persica PRUPE_ppa003531mg N 0.649
orange1.1g043878m.g Citrus sinensis orange1.1g043878m.g N 0.638
PGSC0003DMG400016690 Solanum tuberosum PGSC0003DMG400016690 N 0.638
Solyc03g043600.1 Solanum lycopersicum Solyc03g043600.1 N 0.638
Ciclev10011294m.g Citrus clementina Ciclev10011294m.g N 0.638
POPTR_0004s09080 Populus trichocarpa POPTR_0004s09080 N 0.627
MDP0000237182 Malus domestica MDP0000237182 N 0.616
GLYMA10G34561 Glycine max GLYMA10G34561 N 0.508