CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ADIR003385
(
Anopheles dirus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
ADIR003385
T335524_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
bbx
M03975_2.00
Drosophila melanogaster
NAACAATDNCATTGTTN
NAACAATGNHATTGTTN
SELEX
Nitta et al.(2015)
bbx_1
0.494
0.507
Bbx
M00196_2.00
Mus musculus
TTCATTGA
TCAATGAA
PBM
Badis et al.(2009)
Bbx_3753
0.416
0.464
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ADIR003385-PA
Sox
79
147
SKRTMNAFLMFCKKHRPLVSQHYATKENRSITKILGSWWGQLDAEKKKPYEMLAQEHRTKVKAANPNVR
Links
Other
Sox
family TFs
Other
Anopheles dirus
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AFAF016820
Anopheles farauti
AFAF016820
I
0.548
ASTEI00827
Anopheles stephensi
ASTEI00827
I
0.539
ASTEI11145
Anopheles stephensi
ASTEI11145
I
0.520
AFUN003674
Anopheles funestus
AFUN003674
I
0.513
AATE006341
Anopheles atroparvus
AATE006341
I
0.508
AMIN000258
Anopheles minimus
AMIN000258
I
0.506
YQE_06837
Dendroctonus ponderosae
YQE_06837
I
0.504
LDEC000948
Leptinotarsa decemlineata
LDEC000948
I
0.504
bbx
Drosophila melanogaster
FBgn0024251
D
0.494
GA16961
Drosophila pseudoobscura
FBgn0076975
I
0.494
GF20922
Drosophila ananassae
FBgn0097927
I
0.494
GG19727
Drosophila erecta
FBgn0111928
I
0.494
GI21541
Drosophila mojavensis
FBgn0144271
I
0.494
GM23082
Drosophila sechellia
FBgn0177950
I
0.494
GJ16014
Drosophila virilis
FBgn0203199
I
0.494
GK25081
Drosophila willistoni
FBgn0227040
I
0.494
GE17925
Drosophila yakuba
FBgn0235361
I
0.494
MDOA012813
Musca domestica
MDOA012813
I
0.494
BGIBMGA008274
Bombyx mori
BGIBMGA008274
I
0.487
HMEL012996
Heliconius melpomene
HMEL012996
I
0.487
tetur23g01950
Tetranychus urticae
tetur23g01950
I
0.487
LCUP006498
Lucilia cuprina
LCUP006498
I
0.487
AALB008976
Anopheles albimanus
AALB008976
N
0.487
ISCW010061
Ixodes scapularis
ISCW010061
I
0.480
L798_02329
Zootermopsis nevadensis
L798_02329
I
0.480
TC007499
Tribolium castaneum
TC007499
I
0.477
AMAM016153
Anopheles maculatus
AMAM016153
I
0.474
Hsal_01854--XP_624175.2_APIME
Harpegnathos saltator
Hsal_01854--XP_624175.2_APIME
I
0.469
ADAC009062
Anopheles darlingi
ADAC009062
I
0.457
CpipJ_CPIJ005582
Culex pipiens
CpipJ_CPIJ005582
I
0.445
AAEL011161
Aedes aegypti
AAEL011161
I
0.445
CPIJ005582
Culex quinquefasciatus
CPIJ005582
I
0.445
SMAR012744
Strigamia maritima
SMAR012744
I
0.441
GB48450
Apis mellifera
GB48450
I
0.436
SINV12425
Solenopsis invicta
SINV12425
I
0.436
Cflo_04908--XP_624175.2_APIME
Camponotus floridanus
Cflo_04908--XP_624175.2_APIME
I
0.436
AGAP003896
Anopheles gambiae
AGAP003896
I
0.426
AGAP003897
Anopheles gambiae
AGAP003897
I
0.426
AARA009897
Anopheles arabiensis
AARA009897
I
0.426
ACHR004909
Anopheles christyi
ACHR004909
I
0.426
ACOM034716
Anopheles coluzzii
ACOM034716
I
0.426
AQUA002577
Anopheles quadriannulatus
AQUA002577
I
0.426
KGM_16790
Danaus plexippus
KGM_16790
I
0.425
PHUM230960
Pediculus humanus
PHUM230960
I
0.417
Bbx
Mus musculus
ENSMUSG00000022641
D
0.416
Bbx
Rattus norvegicus
ENSRNOG00000001971
I
0.416