CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AATE006341
(
Anopheles atroparvus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
AATE006341
T335432_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Bbx
M00196_2.00
Mus musculus
TTCATTGA
TCAATGAA
PBM
Badis et al.(2009)
Bbx_3753
0.431
0.406
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AATE006341-PA
Sox
129
201
HRRPVNDFLMFCKVHRGKVSAHFTAKAAPKENRFITRKLGLWWGLLTHEQKLPYKLLADKYKAMYLAAFPDYR
Links
Other
Sox
family TFs
Other
Anopheles atroparvus
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ADIR003385
Anopheles dirus
ADIR003385
I
0.508
AMIN000258
Anopheles minimus
AMIN000258
I
0.473
YQE_06837
Dendroctonus ponderosae
YQE_06837
I
0.464
LDEC000948
Leptinotarsa decemlineata
LDEC000948
I
0.458
AALB008976
Anopheles albimanus
AALB008976
N
0.457
AFUN003674
Anopheles funestus
AFUN003674
I
0.455
AFAF016820
Anopheles farauti
AFAF016820
I
0.452
SCLCIDRAFT_120630
Scleroderma citrinum
SCLCIDRAFT_120630
I
0.445
ASTEI00827
Anopheles stephensi
ASTEI00827
I
0.442
PISMIDRAFT_61363
Pisolithus microcarpus
PISMIDRAFT_61363
I
0.437
M404DRAFT_998162
Pisolithus tinctorius
M404DRAFT_998162
I
0.437
PAXRUDRAFT_130978
Paxillus rubicundulus
PAXRUDRAFT_130978
I
0.437
CY34DRAFT_798812
Suillus luteus
CY34DRAFT_798812
I
0.437
BGLB009093
Biomphalaria glabrata
BGLB009093
I
0.435
AARA009897
Anopheles arabiensis
AARA009897
I
0.432
AGAP003897
Anopheles gambiae
AGAP003897
I
0.432
AGAP003896
Anopheles gambiae
AGAP003896
I
0.432
AQUA002577
Anopheles quadriannulatus
AQUA002577
I
0.432
AEPI004245
Anopheles epiroticus
AEPI004245
I
0.432
ACHR004909
Anopheles christyi
ACHR004909
I
0.432
ACOM034716
Anopheles coluzzii
ACOM034716
I
0.432
Bbx
Rattus norvegicus
ENSRNOG00000001971
I
0.431
bbx
Takifugu rubripes
ENSTRUG00000003077
I
0.431
Bbx
Mus musculus
ENSMUSG00000022641
D
0.431
AMAM016153
Anopheles maculatus
AMAM016153
I
0.430
ADAC009062
Anopheles darlingi
ADAC009062
I
0.427
ASTEI11145
Anopheles stephensi
ASTEI11145
I
0.424
Cflo_04908--XP_624175.2_APIME
Camponotus floridanus
Cflo_04908--XP_624175.2_APIME
I
0.424
GB48450
Apis mellifera
GB48450
I
0.424
SINV12425
Solenopsis invicta
SINV12425
I
0.424
TC007499
Tribolium castaneum
TC007499
I
0.424
CapteG39110
Capitella teleta
CapteG39110
I
0.417
CapteG223458
Capitella teleta
CapteG223458
I
0.417
LotgiG89909
Lottia gigantea
LotgiG89909
I
0.417
CGI_10018417
Crassostrea gigas
CGI_10018417
I
0.417
HCBG_03514
Histoplasma capsulatum
HCBG_03514
I
0.415
HCBG_03464
Histoplasma capsulatum
HCBG_03464
I
0.415
BDDG_02246
Blastomyces dermatitidis
BDDG_02246
I
0.415
CPC735_049570
Coccidioides posadasii
CPC735_049570
I
0.415
CIMG_12783
Coccidioides immitis
CIMG_12783
I
0.415
PABG_03121
Paracoccidioides brasiliensis
PABG_03121
I
0.415
PAAG_02636
Paracoccidioides sp lutzii
PAAG_02636
I
0.415