CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TBX2
(
Equus caballus
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00907 (T-box)
IPR001699
ENSECAG00000024480
T339829_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tbx2
M00830_2.00
Mus musculus
NYVDCACBHN
NDVGTGHBRN
PBM
Weirauch et al.(2013)
pTH3751
0.826
0.783
TBX2
M03556_2.00
Homo sapiens
GGTGTKADDWNTVACACB
VGTGTBANWHHTMACACC
SELEX
Jolma et al.(2013)
TBX2_1
0.826
0.783
TBX2
M03557_2.00
Homo sapiens
NAGGTGTBAWN
NWTVACACCTN
SELEX
Jolma et al.(2013)
TBX2_2
0.826
0.783
TBX2
M05799_2.00
Homo sapiens
NNVRCRCNNN
NNNGYGYBNN
SELEX
Yin et al.(2017)
TBX2_eDBD_HT-SELEX
0.826
0.783
Tbx2
M08044_2.00
Mus musculus
GCHYBCTGGGADHTGTAGTYH
DRACTACADHTCCCAGVRDGC
ChIP-seq
Chen et al.(2011)
SRP001585_Tbx2
0.826
0.783
TBX2
M11381_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX2_Q2
0.826
0.783
TBX2
M11382_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX2_Q5
0.826
0.783
TBX2
M05800_2.00
Homo sapiens
NNVRCRCBNN
NNVGYGYBNN
SELEX
Yin et al.(2017)
TBX2_eDBD_Methyl-HT-SELEX
0.826
0.783
Tbx3
M00834_2.00
Mus musculus
NHNDCACNHN
NDNGTGHNDN
PBM
Weirauch et al.(2013)
pTH3998
0.812
0.739
TBX3
M05801_2.00
Homo sapiens
NDSGTGTBRN
NYVACACSHN
SELEX
Yin et al.(2017)
TBX3_eDBD_HT-SELEX
0.812
0.739
TBX3
M09426_2.00
Homo sapiens
DVDGGTGBNAR
YTNVCACCHBH
Misc
Kulakovskiy et al.(2013)
TBX3_HUMAN.H11MO.0.C
0.812
0.739
Tbx3
M09429_2.00
Mus musculus
RRGGTGBBR
YVVCACCYY
Misc
Kulakovskiy et al.(2013)
TBX3_MOUSE.H11MO.0.B
0.812
0.739
TBX3
M05802_2.00
Homo sapiens
DAGGTGTKAN
NTMACACCTH
SELEX
Yin et al.(2017)
TBX3_eDBD_Methyl-HT-SELEX
0.812
0.739
TBX2
M02495_2.00
Gasterosteus aculeatus
NNVDCACNHN
NDNGTGHBNN
PBM
Weirauch et al.(2014)
pTH9182
0.794
0.761
TBX2
M02496_2.00
Takifugu rubripes
DAGGTGTBRN
NYVACACCTH
PBM
Weirauch et al.(2014)
pTH9289
0.794
0.761
XP_001195863
M02498_2.00
Strongylocentrotus purpuratus
AGGTGTBA
TVACACCT
PBM
Weirauch et al.(2014)
pTH9340
0.754
0.578
XP_008203914.1
M01029_2.00
Nasonia vitripennis
AGGTGTBA
TVACACCT
PBM
SebePedros et al.(2013)
pTH9336
0.749
0.678
Doc3
M03990_2.00
Drosophila melanogaster
NRGGTGTBAD
HTVACACCYN
SELEX
Nitta et al.(2015)
Doc3_1
0.736
0.472
Doc3
M03991_2.00
Drosophila melanogaster
DAGGTGTBAN
NTVACACCTH
SELEX
Nitta et al.(2015)
Doc3_2
0.736
0.472
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSECAP00000022090
T-box
7
187
VTLEAKELWDQFHKLGTEMVITKSGRLTLFPFRVRVLGSDRQKRYLPGVTTTGGDIAQKEKHAHPYLVSSSRANTRVPERMYIHPSPATGEQWMAKPVAFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQLKIDNNPFAKGFRD
Links
Other
T-box
family TFs
Other
Equus caballus
TFs
188 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000008826
Ailuropoda melanoleuca
ENSAMEG00000008826
I
0.826
TBX2
Bos taurus
ENSBTAG00000014278
I
0.826
ENSCPOG00000001042
Cavia porcellus
ENSCPOG00000001042
I
0.826
tbx2a
Danio rerio
ENSDARG00000018025
I
0.826
ENSFALG00000005458
Ficedula albicollis
ENSFALG00000005458
I
0.826
TBX2
Homo sapiens
ENSG00000121068
D
0.826
ENSGALG00000023577
Gallus gallus
ENSGALG00000023577
I
0.826
TBX2
Loxodonta africana
ENSLAFG00000006596
I
0.826
ENSLOCG00000005074
Lepisosteus oculatus
ENSLOCG00000005074
I
0.826
ENSMEUG00000010232
Macropus eugenii
ENSMEUG00000010232
I
0.826
TBX2
Microcebus murinus
ENSMICG00000016649
I
0.826
TBX2
Myotis lucifugus
ENSMLUG00000011673
I
0.826
ENSMMUG00000009859
Macaca mulatta
ENSMMUG00000009859
I
0.826
TBX2
Monodelphis domestica
ENSMODG00000014204
I
0.826
ENSMPUG00000015118
Mustela putorius furo
ENSMPUG00000015118
I
0.826
Tbx2
Mus musculus
ENSMUSG00000000093
D
0.826
ENSNLEG00000000423
Nomascus leucogenys
ENSNLEG00000000423
I
0.826
TBX2
Otolemur garnettii
ENSOGAG00000014815
I
0.826
TBX2
Ochotona princeps
ENSOPRG00000012183
I
0.826
ENSPSIG00000017536
Pelodiscus sinensis
ENSPSIG00000017536
I
0.826
TBX2
Pan troglodytes
ENSPTRG00000009489
I
0.826
ENSSHAG00000012290
Sarcophilus harrisii
ENSSHAG00000012290
I
0.826
TBX2
Sus scrofa
ENSSSCG00000027060
I
0.826
ENSSTOG00000009350
Ictidomys tridecemlineatus
ENSSTOG00000009350
I
0.826
TBX2
Tursiops truncatus
ENSTTRG00000004541
I
0.826
Alligator_sinensis_CCG002051.1
Alligator sinensis
Alligator_sinensis_CCG002051.1
I
0.826
Ogr11256
Ophisaurus gracilis
Ogr11256
I
0.826
tbx2
Xenopus tropicalis
XB-GENE-1018115
I
0.826
tbx2.L
Xenopus laevis
XB-GENE-1018122
I
0.826
AAI57537
Xenopus tropicalis
AAI57537
I
0.820
tbx2.S
Xenopus laevis
XB-GENE-6255176
I
0.820
TBX2
Taeniopygia guttata
ENSTGUG00000007813
I
0.819
ENSLACG00000015364
Latimeria chalumnae
ENSLACG00000015364
I
0.817
Pvit_13524
Pogona vitticeps
Pvit_13524
I
0.817
ENSAMXG00000001528
Astyanax mexicanus
ENSAMXG00000001528
I
0.815
tbx2b
Danio rerio
ENSDARG00000006120
I
0.815
ENSAMEG00000001090
Ailuropoda melanoleuca
ENSAMEG00000001090
I
0.812
TBX3
Bos taurus
ENSBTAG00000021706
I
0.812
TBX3
Canis familiaris
ENSCAFG00000009216
I
0.812
TBX3
Callithrix jacchus
ENSCJAG00000009716
I
0.812
TBX3
Cavia porcellus
ENSCPOG00000003952
I
0.812
ENSCSAG00000002344
Chlorocebus sabaeus
ENSCSAG00000002344
I
0.812
TBX3
Dasypus novemcinctus
ENSDNOG00000044358
I
0.812
ENSECAG00000012861
Equus caballus
ENSECAG00000012861
I
0.812
TBX3
Erinaceus europaeus
ENSEEUG00000008506
I
0.812
ENSFALG00000007792
Ficedula albicollis
ENSFALG00000007792
I
0.812
TBX3
Homo sapiens
ENSG00000135111
D
0.812
ENSGALG00000008250
Gallus gallus
ENSGALG00000008250
I
0.812
TBX3
Gorilla gorilla
ENSGGOG00000004238
I
0.812
ENSLACG00000006293
Latimeria chalumnae
ENSLACG00000006293
I
0.812
TBX3
Loxodonta africana
ENSLAFG00000002948
I
0.812
ENSLOCG00000007598
Lepisosteus oculatus
ENSLOCG00000007598
I
0.812
ENSMGAG00000010084
Meleagris gallopavo
ENSMGAG00000010084
I
0.812
TBX3
Microcebus murinus
ENSMICG00000010947
I
0.812
TBX3
Myotis lucifugus
ENSMLUG00000007567
I
0.812
TBX3
Macaca mulatta
ENSMMUG00000015070
I
0.812
ENSMPUG00000002720
Mustela putorius furo
ENSMPUG00000002720
I
0.812
Tbx3
Mus musculus
ENSMUSG00000018604
D
0.812
ENSNLEG00000000224
Nomascus leucogenys
ENSNLEG00000000224
I
0.812
TBX3
Ornithorhynchus anatinus
ENSOANG00000007095
I
0.812
ENSOARG00000006249
Ovis aries
ENSOARG00000006249
I
0.812
TBX3
Oryctolagus cuniculus
ENSOCUG00000014595
I
0.812
TBX3
Otolemur garnettii
ENSOGAG00000016212
I
0.812
TBX3
Ochotona princeps
ENSOPRG00000004462
I
0.812
ENSPANG00000008730
Papio anubis
ENSPANG00000008730
I
0.812
ENSPPYG00000004995
Pongo abelii
ENSPPYG00000004995
I
0.812
TBX3
Pan troglodytes
ENSPTRG00000023749
I
0.812
Tbx3
Rattus norvegicus
ENSRNOG00000008706
I
0.812
ENSSHAG00000004253
Sarcophilus harrisii
ENSSHAG00000004253
I
0.812
TBX3
Sus scrofa
ENSSSCG00000009865
I
0.812
ENSSTOG00000009817
Ictidomys tridecemlineatus
ENSSTOG00000009817
I
0.812
TBX3
Tupaia belangeri
ENSTBEG00000014612
I
0.812
ENSTSYG00000008994
Tarsius syrichta
ENSTSYG00000008994
I
0.812
Afo_R010397
Aptenodytes forsteri
Afo_R010397
I
0.812
Alligator_sinensis_CCG008095.1
Alligator sinensis
Alligator_sinensis_CCG008095.1
I
0.812
Cmyd_10018098
Chelonia mydas
Cmyd_10018098
I
0.812
ENSBTAP00000028930-D1
Bos grunniens
ENSBTAP00000028930-D1
I
0.812
ENSP00000257566
Macaca fascicularis
ENSP00000257566
I
0.812
Myotis_brandtii_Tbx3_10028216
Myotis brandtii
Myotis_brandtii_Tbx3_10028216
I
0.812
Ogr02099
Ophisaurus gracilis
Ogr02099
I
0.812
Pvit_16429
Pogona vitticeps
Pvit_16429
I
0.812
ENSAMXG00000007070
Astyanax mexicanus
ENSAMXG00000007070
I
0.811
ENSONIG00000011959
Oreochromis niloticus
ENSONIG00000011959
I
0.811
Gfo_R010838
Geospiza fortis
Gfo_R010838
I
0.809
tbx3b
Danio rerio
ENSDARG00000061509
I
0.806
tbx3.S
Xenopus laevis
XB-GENE-1018237
I
0.803
tbx3.L
Xenopus laevis
XB-GENE-6252891
I
0.803
TBX4
Meleagris gallopavo
ENSMGAG00000007617
I
0.802
TBX3
Monodelphis domestica
ENSMODG00000012059
I
0.799
tbx2b
Oryzias latipes
ENSORLG00000010011
I
0.798
tbx3
Xenopus tropicalis
XB-GENE-1018231
I
0.798
TBX2
Gasterosteus aculeatus
ENSGACG00000013575
D
0.794
ENSGMOG00000002896
Gadus morhua
ENSGMOG00000002896
I
0.794
ENSONIG00000010454
Oreochromis niloticus
ENSONIG00000010454
I
0.794
TBX2
Oryzias latipes
ENSORLG00000014792
I
0.794
ENSPFOG00000016384
Poecilia formosa
ENSPFOG00000016384
I
0.794
TBX2
Takifugu rubripes
ENSTRUG00000008297
D
0.794
ENSXMAG00000005715
Xiphophorus maculatus
ENSXMAG00000005715
I
0.794
tbx2b
Gasterosteus aculeatus
ENSGACG00000020309
I
0.785
fgenesh2_pg.scaffold_89000016
Branchiostoma floridae
fgenesh2_pg.scaffold_89000016
I
0.783
ENSXMAG00000000486
Xiphophorus maculatus
ENSXMAG00000000486
I
0.782
ENSONIG00000001919
Oreochromis niloticus
ENSONIG00000001919
I
0.780
ENSAMXG00000009197
Astyanax mexicanus
ENSAMXG00000009197
I
0.779
tbx3a
Danio rerio
ENSDARG00000002216
I
0.779
tbx3a
Gasterosteus aculeatus
ENSGACG00000016783
I
0.779
ENSGMOG00000011728
Gadus morhua
ENSGMOG00000011728
I
0.779
ENSONIG00000000187
Oreochromis niloticus
ENSONIG00000000187
I
0.779
tbx3a
Oryzias latipes
ENSORLG00000007316
I
0.779
ENSPFOG00000024759
Poecilia formosa
ENSPFOG00000024759
I
0.779
tbx3a
Tetraodon nigroviridis
ENSTNIG00000009035
I
0.779
TBX2
Tetraodon nigroviridis
ENSTNIG00000014395
I
0.779
tbx3a
Takifugu rubripes
ENSTRUG00000015097
I
0.779
ENSXMAG00000005372
Xiphophorus maculatus
ENSXMAG00000005372
I
0.779
tbx-2
Caenorhabditis elegans
WBGene00006543
I
0.778
ANCCAN_17341
Ancylostoma caninum
ANCCAN_17341
I
0.774
ANCCEY_07585
Ancylostoma ceylanicum
ANCCEY_07585
I
0.774
ACAC_0001257201
Angiostrongylus cantonensis
ACAC_0001257201
I
0.773
ACOC_0000095801
Angiostrongylus costaricensis
ACOC_0000095801
I
0.773
DICVIV_03029
Dictyocaulus viviparus
DICVIV_03029
I
0.773
HCOI00950300
Haemonchus contortus
HCOI00950300
I
0.773
HPLM_0000823101
Haemonchus placei
HPLM_0000823101
I
0.773
TELCIR_02934
Teladorsagia circumcincta
TELCIR_02934
I
0.773
Cmyd_10016207
Chelonia mydas
Cmyd_10016207
I
0.772
D918_00588
Trichuris suis
D918_00588
I
0.770
TMUE_s0121001900
Trichuris muris
TMUE_s0121001900
I
0.770
TTRE_0000604401
Trichuris trichiura
TTRE_0000604401
I
0.770
ENSGMOG00000012645
Gadus morhua
ENSGMOG00000012645
I
0.765
CGI_10016325
Crassostrea gigas
CGI_10016325
I
0.763
HelroG63904
Helobdella robusta
HelroG63904
I
0.761
Sakowv30012255m.g
Saccoglossus kowalevskii
Sakowv30012255m.g
I
0.758
tbx2b
Takifugu rubripes
ENSTRUG00000009981
I
0.757
Bm3498
Brugia malayi
Bm3498
I
0.755
ASU_08095
Ascaris suum
ASU_08095
I
0.755
PTRK_0001005500
Parastrongyloides trichosuri
PTRK_0001005500
I
0.755
CBG21316
Caenorhabditis briggsae
CBG21316
I
0.754
CJA11793
Caenorhabditis japonica
CJA11793
I
0.754
CRE29327
Caenorhabditis remanei
CRE29327
I
0.754
XP_001195863
Strongylocentrotus purpuratus
XP_001195863
D
0.754
EFV62265
Trichinella spiralis
EFV62265
I
0.752
WBGene00245873
Onchocerca volvulus
WBGene00245873
I
0.752
D917_09589
Trichinella nativa
D917_09589
I
0.752
ENSAPLG00000010653
Anas platyrhynchos
ENSAPLG00000010653
I
0.751
SMU15026199
Schmidtea mediterranea
SMU15026199
I
0.751
ACYPI000143
Acyrthosiphon pisum
ACYPI000143
I
0.750
ENSCING00000008678
Ciona intestinalis
ENSCING00000008678
I
0.750
ENSCSAVG00000009650
Ciona savignyi
ENSCSAVG00000009650
I
0.750
tbx2b
Tetraodon nigroviridis
ENSTNIG00000010765
I
0.750
tetur33g01070
Tetranychus urticae
tetur33g01070
I
0.750
AAEL018223
Aedes aegypti
AAEL018223
I
0.749
GB49684
Apis mellifera
GB49684
I
0.749
XP_008203914.1
Nasonia vitripennis
XP_008203914.1
D
0.749
NEMVEDRAFT_v1g102530
Nematostella vectensis
NEMVEDRAFT_v1g102530
I
0.748
SPU_023386
Strongylocentrotus purpuratus
SPU_023386
I
0.748
GH16540
Drosophila grimshawi
FBgn0124011
I
0.747
NECAME_13239
Necator americanus
NECAME_13239
I
0.747
SPAL_0001704100
Strongyloides papillosus
SPAL_0001704100
I
0.746
SSTP_0000270400
Strongyloides stercoralis
SSTP_0000270400
I
0.746
SVE_1909900
Strongyloides venezuelensis
SVE_1909900
I
0.746
CBN26017
Caenorhabditis brenneri
CBN26017
I
0.745
CGI_10016324
Crassostrea gigas
CGI_10016324
I
0.740
DAPPUDRAFT_13272
Daphnia pulex
DAPPUDRAFT_13272
I
0.740
bi
Drosophila melanogaster
FBgn0000179
I
0.740
bi
Drosophila virilis
FBgn0020983
I
0.740
GL14298
Drosophila persimilis
FBgn0151903
I
0.740
GM12345
Drosophila sechellia
FBgn0167282
I
0.740
GK15734
Drosophila willistoni
FBgn0217737
I
0.740
GE16345
Drosophila yakuba
FBgn0233875
I
0.740
GA22741
Drosophila pseudoobscura
FBgn0244144
I
0.740
LotgiG116991
Lottia gigantea
LotgiG116991
I
0.740
HNAJ_0001193901
Hymenolepis nana
HNAJ_0001193901
I
0.739
AAI69776
Xenopus laevis
AAI69776
I
0.737
ABC75836
Xenopus laevis
ABC75836
I
0.737
BAC20262
Xenopus laevis
BAC20262
I
0.737
tbx6
Xenopus tropicalis
XB-GENE-6257419
I
0.737
CapteG163410
Capitella teleta
CapteG163410
I
0.736
Doc3
Drosophila melanogaster
FBgn0035954
D
0.736
GA18655
Drosophila pseudoobscura
FBgn0078655
I
0.736
GF24374
Drosophila ananassae
FBgn0101368
I
0.736
GG14368
Drosophila erecta
FBgn0106627
I
0.736
GL15033
Drosophila persimilis
FBgn0152637
I
0.736
GM25112
Drosophila sechellia
FBgn0179973
I
0.736
GD14148
Drosophila simulans
FBgn0185836
I
0.736
GK12352
Drosophila willistoni
FBgn0214362
I
0.736
GE20799
Drosophila yakuba
FBgn0238093
I
0.736
CapteG152028
Capitella teleta
CapteG152028
I
0.734
ENSOANG00000020395
Ornithorhynchus anatinus
ENSOANG00000020395
I
0.407
SCUD_0001668701
Schistosoma curassoni
SCUD_0001668701
I
0.105
SMRZ_0000901601
Schistosoma margrebowiei
SMRZ_0000901601
I
0.105