L898_g10464 (Steinernema monticolum)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 L898_g10464 T341791_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbx2
M00830_2.00 		Mus musculus
NYVDCACBHN
NDVGTGHBRN		 PBM
Weirauch et al.(2013)
pTH3751 		0.736 0.718
TBX2
M03556_2.00 		Homo sapiens
GGTGTKADDWNTVACACB
VGTGTBANWHHTMACACC		 SELEX
Jolma et al.(2013)
TBX2_1 		0.736 0.718
TBX2
M03557_2.00 		Homo sapiens
NAGGTGTBAWN
NWTVACACCTN		 SELEX
Jolma et al.(2013)
TBX2_2 		0.736 0.718
TBX2
M05799_2.00 		Homo sapiens
NNVRCRCNNN
NNNGYGYBNN		 SELEX
Yin et al.(2017)
TBX2_eDBD_HT-SELEX 		0.736 0.718
Tbx2
M08044_2.00 		Mus musculus
GCHYBCTGGGADHTGTAGTYH
DRACTACADHTCCCAGVRDGC		 ChIP-seq
Chen et al.(2011)
SRP001585_Tbx2 		0.736 0.718
TBX2
M11381_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX2_Q2 		0.736 0.718
TBX2
M11382_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX2_Q5 		0.736 0.718
TBX2
M05800_2.00 		Homo sapiens
NNVRCRCBNN
NNVGYGYBNN		 SELEX
Yin et al.(2017)
TBX2_eDBD_Methyl-HT-SELEX 		0.736 0.718
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L898_g10464.t1 T-box 76 256
L898_g10464.t2 T-box 76 259
L898_g10464.t3 T-box 163 343

Links

Other T-box family TFs
Other Steinernema monticolum TFs

101 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L893_g17881 Steinernema glaseri L893_g17881 I 0.887
L889_g18009 Steinernema feltiae L889_g18009 I 0.884
L892_g3119 Steinernema scapterisci L892_g3119 I 0.869
L596_g26549 Steinernema carpocapsae L596_g26549 I 0.869
SPAL_0001704100 Strongyloides papillosus SPAL_0001704100 I 0.811
SSTP_0000270400 Strongyloides stercoralis SSTP_0000270400 I 0.811
SVE_1909900 Strongyloides venezuelensis SVE_1909900 I 0.811
RSKR_0001075800 Rhabditophanes kr3021 RSKR_0001075800 I 0.802
PTRK_0001005500 Parastrongyloides trichosuri PTRK_0001005500 I 0.802
RSKR_0000042800 Rhabditophanes kr3021 RSKR_0000042800 I 0.796
WBGene00245873 Onchocerca volvulus WBGene00245873 I 0.777
CBN26017 Caenorhabditis brenneri CBN26017 I 0.774
NEMVEDRAFT_v1g102530 Nematostella vectensis NEMVEDRAFT_v1g102530 I 0.773
CJA11793 Caenorhabditis japonica CJA11793 I 0.773
EmuJ_001171900 Echinococcus multilocularis EmuJ_001171900 I 0.770
ASU_08095 Ascaris suum ASU_08095 I 0.767
Bm3498 Brugia malayi Bm3498 I 0.767
CBG21316 Caenorhabditis briggsae CBG21316 I 0.765
CRE29327 Caenorhabditis remanei CRE29327 I 0.765
NECAME_13239 Necator americanus NECAME_13239 I 0.762
ANCCEY_07585 Ancylostoma ceylanicum ANCCEY_07585 I 0.762
ANCCAN_17341 Ancylostoma caninum ANCCAN_17341 I 0.762
HNAJ_0001193901 Hymenolepis nana HNAJ_0001193901 I 0.762
DICVIV_03029 Dictyocaulus viviparus DICVIV_03029 I 0.760
HCOI00950300 Haemonchus contortus HCOI00950300 I 0.760
TELCIR_02934 Teladorsagia circumcincta TELCIR_02934 I 0.760
ACOC_0000095801 Angiostrongylus costaricensis ACOC_0000095801 I 0.760
HPLM_0000823101 Haemonchus placei HPLM_0000823101 I 0.760
ACAC_0001257201 Angiostrongylus cantonensis ACAC_0001257201 I 0.760
Hba_14542 Heterorhabditis bacteriophora Hba_14542 I 0.757
tbx3.S Xenopus laevis XB-GENE-1018237 I 0.755
tbx-2 Caenorhabditis elegans WBGene00006543 I 0.754
TTRE_0000604401 Trichuris trichiura TTRE_0000604401 I 0.753
TMUE_s0121001900 Trichuris muris TMUE_s0121001900 I 0.753
D918_00588 Trichuris suis D918_00588 I 0.753
ENSAMXG00000009197 Astyanax mexicanus ENSAMXG00000009197 I 0.752
tbx3a Takifugu rubripes ENSTRUG00000015097 I 0.752
ENSXMAG00000005372 Xiphophorus maculatus ENSXMAG00000005372 I 0.752
tbx3a Tetraodon nigroviridis ENSTNIG00000009035 I 0.752
tbx3a Gasterosteus aculeatus ENSGACG00000016783 I 0.752
ENSPFOG00000024759 Poecilia formosa ENSPFOG00000024759 I 0.752
ENSGMOG00000011728 Gadus morhua ENSGMOG00000011728 I 0.752
ENSONIG00000000187 Oreochromis niloticus ENSONIG00000000187 I 0.752
tbx3a Danio rerio ENSDARG00000002216 I 0.752
tbx3a Oryzias latipes ENSORLG00000007316 I 0.752
LotgiG117095 Lottia gigantea LotgiG117095 I 0.748
ENSLOCG00000007598 Lepisosteus oculatus ENSLOCG00000007598 I 0.746
fgenesh2_pg.scaffold_89000016 Branchiostoma floridae fgenesh2_pg.scaffold_89000016 I 0.746
ENSLACG00000015364 Latimeria chalumnae ENSLACG00000015364 I 0.745
Pvit_13524 Pogona vitticeps Pvit_13524 I 0.745
ACYPI000143 Acyrthosiphon pisum ACYPI000143 I 0.745
tetur33g01070 Tetranychus urticae tetur33g01070 I 0.745
HelroG63904 Helobdella robusta HelroG63904 I 0.744
tbx3 Xenopus tropicalis XB-GENE-1018231 I 0.743
ENSAMXG00000001528 Astyanax mexicanus ENSAMXG00000001528 I 0.743
tbx2b Danio rerio ENSDARG00000006120 I 0.743
tbx3.L Xenopus laevis XB-GENE-6252891 I 0.743
tbx2.S Xenopus laevis XB-GENE-6255176 I 0.742
EFV62265 Trichinella spiralis EFV62265 I 0.741
D917_09589 Trichinella nativa D917_09589 I 0.741
ENSGMOG00000012645 Gadus morhua ENSGMOG00000012645 I 0.739
ENSXMAG00000000486 Xiphophorus maculatus ENSXMAG00000000486 I 0.737
AAI57537 Xenopus tropicalis AAI57537 I 0.736
tbx2.L Xenopus laevis XB-GENE-1018122 I 0.736
tbx2 Xenopus tropicalis XB-GENE-1018115 I 0.736
bi Drosophila virilis FBgn0020983 I 0.736
TBX2 Microcebus murinus ENSMICG00000016649 I 0.736
ENSMEUG00000010232 Macropus eugenii ENSMEUG00000010232 I 0.736
ENSLOCG00000005074 Lepisosteus oculatus ENSLOCG00000005074 I 0.736
TBX2 Myotis lucifugus ENSMLUG00000011673 I 0.736
ENSMMUG00000009859 Macaca mulatta ENSMMUG00000009859 I 0.736
ENSMPUG00000015118 Mustela putorius furo ENSMPUG00000015118 I 0.736
TBX2 Monodelphis domestica ENSMODG00000014204 I 0.736
TBX2 Loxodonta africana ENSLAFG00000006596 I 0.736
ENSGALG00000023577 Gallus gallus ENSGALG00000023577 I 0.736
TBX2 Bos taurus ENSBTAG00000014278 I 0.736
ENSAMEG00000008826 Ailuropoda melanoleuca ENSAMEG00000008826 I 0.736
DAPPUDRAFT_13272 Daphnia pulex DAPPUDRAFT_13272 I 0.736
ENSCPOG00000001042 Cavia porcellus ENSCPOG00000001042 I 0.736
tbx2a Danio rerio ENSDARG00000018025 I 0.736
TBX2 Homo sapiens ENSG00000121068 D 0.736
ENSFALG00000005458 Ficedula albicollis ENSFALG00000005458 I 0.736
Tbx2 Mus musculus ENSMUSG00000000093 D 0.736
ENSNLEG00000000423 Nomascus leucogenys ENSNLEG00000000423 I 0.736
GM12345 Drosophila sechellia FBgn0167282 I 0.736
GL14298 Drosophila persimilis FBgn0151903 I 0.736
bi Drosophila melanogaster FBgn0000179 I 0.736
GK15734 Drosophila willistoni FBgn0217737 I 0.736
GE16345 Drosophila yakuba FBgn0233875 I 0.736
Alligator_sinensis_CCG002051.1 Alligator sinensis Alligator_sinensis_CCG002051.1 I 0.736
GA22741 Drosophila pseudoobscura FBgn0244144 I 0.736
TBX2 Tursiops truncatus ENSTTRG00000004541 I 0.736
ENSSTOG00000009350 Ictidomys tridecemlineatus ENSSTOG00000009350 I 0.736
TBX2 Ochotona princeps ENSOPRG00000012183 I 0.736
TBX2 Otolemur garnettii ENSOGAG00000014815 I 0.736
ENSPSIG00000017536 Pelodiscus sinensis ENSPSIG00000017536 I 0.736
TBX2 Pan troglodytes ENSPTRG00000009489 I 0.736
TBX2 Sus scrofa ENSSSCG00000027060 I 0.736
ENSSHAG00000012290 Sarcophilus harrisii ENSSHAG00000012290 I 0.736
Ogr11256 Ophisaurus gracilis Ogr11256 I 0.736