CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART02G27750
(
Oryza barthii
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
OBART02G27750
T003091_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT1G63040
M06590_2.00
Arabidopsis thaliana
TTGAAA
TTTCAA
Dap-seq
OMalley et al.(2016)
AT1G63040_col_a
0.681
0.833
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART02G27750.1
AP2
70
119
FYRGIRCRSGKWVSEIREPRKARRIWLGTYPTAEMAAAAYDVAARALRGA
Links
Other
AP2
family TFs
Other
Oryza barthii
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB04096.1
Alternaria brassicicola
AB04096.1
N
0.000
BAUCODRAFT_141759
Baudoinia compniacensis
BAUCODRAFT_141759
N
0.000
CCM_04908
Cordyceps militaris
CCM_04908
N
0.000
COCC4DRAFT_160284
Bipolaris maydis
COCC4DRAFT_160284
N
0.000
COCCADRAFT_99640
Bipolaris zeicola
COCCADRAFT_99640
N
0.000
COCMIDRAFT_2323
Bipolaris oryzae
COCMIDRAFT_2323
N
0.000
COCSADRAFT_243860
Bipolaris sorokiniana
COCSADRAFT_243860
N
0.000
COCVIDRAFT_39305
Bipolaris victoriae
COCVIDRAFT_39305
N
0.000
estExt_Genewise1Plus.C_11595
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_11595
N
0.000
PTRG_00020
Pyrenophora triticirepentis
PTRG_00020
N
0.000
PTT_12090
Pyrenophora teres
PTT_12090
N
0.000
PV11_00756
Exophiala sideris
PV11_00756
N
0.000
SNOG_11733
Stagonospora nodorum
SNOG_11733
N
0.000