CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI02G31100
(
Oryza meridionalis
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
OMERI02G31100
T003406_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI02G31100.1
AP2
26
61
AMMFPHGGASVYLGSYDTEEKAARSYDVAALKYWGQ
OMERI02G31100.1
AP2
103
155
SIYRGVTRRQKDGRWQARIGLVAGTRDIYLGTFKTEEEAAEAYDIAAIEIRGK
OMERI02G31100.2
AP2
181
238
SSFHGVTRHRWSGKYEAHLWDSSCRMEGRRRKGKQGSYDTEEKAARSYDVAALKYWGQ
OMERI02G31100.2
AP2
280
332
SIYRGVTRRQKDGRWQARIGLVAGTRDIYLGTFKTEEEAAEAYDIAAIEIRGK
Links
Other
AP2
family TFs
Other
Oryza meridionalis
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LPERR02G26580
Leersia perrieri
LPERR02G26580
N
0.889
MLOC_76689
Hordeum vulgare
MLOC_76689
N
0.876
Traes_6AL_CE4E76E1A
Triticum aestivum
Traes_6AL_CE4E76E1A
N
0.870
OBART02G32450
Oryza barthii
OBART02G32450
N
0.870
ORUFI02G34150
Oryza rufipogon
ORUFI02G34150
N
0.870
OPUNC02G30010
Oryza punctata
OPUNC02G30010
N
0.848
TRIUR3_24654
Triticum urartu
TRIUR3_24654
N
0.840
F775_28442
Aegilops tauschii
F775_28442
N
0.840
Traes_6BL_340C2A897
Triticum aestivum
Traes_6BL_340C2A897
N
0.840
Traes_6DL_2BAA4B7AA
Triticum aestivum
Traes_6DL_2BAA4B7AA
N
0.840
Si017580m.g
Setaria italica
Si017580m.g
N
0.836
OB02G39430
Oryza brachyantha
OB02G39430
N
0.835
OS02G0747600
Oryza sativa
OS02G0747600
N
0.833
ORGLA02G0280000
Oryza glaberrima
ORGLA02G0280000
N
0.833
GRMZM2G130459
Zea mays
GRMZM2G130459
N
0.831
Pavir.Ab02943
Panicum virgatum
Pavir.Ab02943
N
0.828
Sb04g027940
Sorghum bicolor
Sb04g027940
N
0.828
Pavir.Aa00475
Panicum virgatum
Pavir.Aa00475
N
0.826
BRADI3G59300
Brachypodium distachyon
BRADI3G59300
N
0.814